Staphylococcus delphini: NCTC12225_01320
Help
Entry
NCTC12225_01320 CDS
T06587
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp03030
DNA replication
sdp03410
Base excision repair
sdp03420
Nucleotide excision repair
sdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12225_01320 (polA)
03410 Base excision repair
NCTC12225_01320 (polA)
03420 Nucleotide excision repair
NCTC12225_01320 (polA)
03440 Homologous recombination
NCTC12225_01320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdp03032
]
NCTC12225_01320 (polA)
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_01320 (polA)
Enzymes [BR:
sdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12225_01320 (polA)
DNA replication proteins [BR:
sdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC12225_01320 (polA)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC12225_01320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12225_01320 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VED62702
LinkDB
All DBs
Position
1:1330689..1333316
Genome browser
AA seq
875 aa
AA seq
DB search
MDKLILIDGNSLSFRAFYALPLLKNKAGIHTNAIYGFARLLEKIIKEEQPTHFLVAFDAG
KTTFRHETYQDYKGGRQKTPPELSEQFPYIRQLIDAYQIQRYELENYEADDIIGTLSREA
DEAGMQTIIITGDRDLTQLATDQVTIYYTKKGVTDVDHYTPKFIAEKYNGLTPSQIVDLK
GLMGDTSDNIPGVAGVGEKTALKLLNQFETVEGVYDHIGEVSGKKLKEKLENSRDDALMS
KTLATINCDSPITVSLKDTRLPQNIDESAKIELFKSLEFRQLLDGMDVEADNATASRDFE
PINDMSKIDFNQLSEAAIHVEVAGSNYLKDELLKFGLYDGEHYVVIPFDKVSEYPELVAW
LEEETTQKWVHDAKKTYIAMKRSDIAIQNVVFDTMLASYIIDPSRTIDDVQSVMTHFEQT
FVQDDVSVYGKGKSFHIPEDEVLDKHIASILDAIHVVQPQMMTILEAHEQTSLLSEIELP
LALILSEMEYIGIHTDIDTLKEMETVIQTELDQLIEQIHEQAGETFNINSPKQLGVILFE
KLELPVIKKTKTGYSTAVDVLEKLQNAHPIIDYILTYRTLSKLQSTYVEGLQKVIWDDGR
IHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKSTHDDYVILAADYSQIELRV
LAHITGDPTLQQAFNDNEDVHTTTAMKVFNVAADEVTSLMRRQAKAVNFGIVYGISDYGL
SQSLGITRKEAQQFIDDYLNHFPGVKDYMDNIVQDAKQQGYVETLLKRRRYIPDITSRNF
NLRGFAERTAMNSPIQGSAADIIKLAMVQFHREVQKTSFKAQLLLQVHDELIFEVPKDEV
DEFSKFVEEIMAHALQLDVPLSVESDYGKTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaacttatattaattgatggtaatagtttaagttttagagctttttatgcattg
ccgttgttaaaaaataaagcagggattcatacaaatgccatatatggttttgcgcgtttg
ttagaaaagattattaaagaagaacaaccgacgcattttctcgtggcattcgacgctgga
aaaacgacatttagacatgagacgtatcaagattataaagggggacgtcaaaaaacgccg
cctgaattgagtgagcagttcccgtatattcgccaattaatagatgcctatcaaattcaa
cgttatgaacttgaaaactatgaagcagatgatattattggaacacttagtcgtgaagcg
gatgaagcgggcatgcaaacaatcatcattactggggaccgagatttaacccaactcgct
acagaccaagtgacaatctattatacgaaaaaaggtgtgacggacgttgatcattacaca
ccaaagtttattgctgaaaaatataatgggctcacaccgtctcaaattgttgatttaaaa
ggcttaatgggagatacttctgacaatattccaggtgtggcaggtgtcggtgaaaaaaca
gcgctgaaactgttaaatcaatttgaaacagttgaaggtgtttatgaccatattggagaa
gtgtcaggtaaaaagctaaaagaaaaacttgaaaatagtcgggatgatgcgttaatgagt
aaaactttagcgacgattaattgtgatagtccgattacagtatcactcaaagacacacgt
ttacctcaaaatatagatgaaagtgctaaaatcgagttgttcaagtcgttagaattccgt
cagttgctcgatgggatggatgtcgaggcagacaatgctacggcgagtcgagattttgag
ccgataaatgacatgtcaaaaatagattttaaccaattgtcagaagcggcgattcatgtt
gaagttgcgggatcaaattacttaaaagatgagttattaaaatttggtttgtacgacggc
gaacattatgtcgtgattccatttgacaaggtcagtgaatatccagagttagtggcttgg
ttagaagaggaaacgacgcaaaaatgggtacatgatgcgaagaaaacgtatattgcgatg
aaacgttcagacattgccattcaaaatgttgtttttgatacgatgttagcgagctatatt
atcgatccctcgcgtacgattgatgatgtacagtctgtcatgacgcattttgagcaaacg
ttcgtgcaagatgatgtgtcggtttatggtaaaggcaaatctttccacatacctgaagat
gaggtgctcgataaacatattgcttctattttagatgcgattcatgtcgtgcaaccacaa
atgatgaccattcttgaagcgcatgagcagacatcattactttcagagattgagttgcca
cttgcgctcattttaagtgaaatggaatatatagggattcatactgacatcgacacatta
aaagagatggaaacagtcattcaaacagagttggatcagttaatcgaacaaattcatgaa
caagctggtgaaacgtttaacattaactcacctaaacaattaggcgtcattttatttgaa
aaacttgagttgccagtcattaaaaagacgaaaacgggttattcaacagcagtcgatgta
ctcgaaaaattgcaaaatgcacatccaattatcgactacattttaacatatcgtacatta
tcgaaactgcagtcgacttatgttgaaggtttacaaaaagtgatttgggatgacggtcgt
attcatacacgttttaatcaaacgctagcacaaacaggtcgtctgtcttcggtggacccg
aacttacaaaacattccaattcgtttagaagagggacgtaaaattcgtaaagcgtttaag
tctacgcacgatgattatgtcattcttgcagcggattactcacaaattgaattacgtgtt
ttagcccatattacaggagacccgacgttgcaacaagcgtttaatgataatgaagatgtc
catactacaactgcgatgaaagtgtttaacgttgcagctgatgaggtcacgtcattaatg
cgtcgccaagcaaaagcggtgaactttggtatcgtctatggcattagtgattatgggctg
agtcaaagtttaggtataacacgtaaagaagcgcaacaatttattgatgattacttgaac
cattttccaggtgtgaaagattatatggacaacattgtgcaagatgccaaacaacaagga
tacgtggagacattgttaaaacgccgtcgttacattccagacattacgagtcgtaacttt
aacttacgtggatttgcagaacgaactgcgatgaactcgccaattcaaggaagtgcggca
gatattataaaattagcgatggtccaattccaccgtgaagtacaaaagacatcgtttaaa
gctcagttattgttacaagtacacgatgaattgatttttgaagtgccgaaagatgaagta
gatgaattcagcaaatttgttgaggaaattatggcgcatgcattacaattagatgtccca
ttaagtgtagaatcagattatgggaaaacttggtatgatgcaaaatag
DBGET
integrated database retrieval system
