Staphylococcus delphini: NCTC12225_01556
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Entry
NCTC12225_01556 CDS
T06587
Symbol
pbp2
Name
(GenBank) penicillin-binding protein 2
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00550
Peptidoglycan biosynthesis
sdp01100
Metabolic pathways
sdp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC12225_01556 (pbp2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC12225_01556 (pbp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdp01003
]
NCTC12225_01556 (pbp2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdp01011
]
NCTC12225_01556 (pbp2)
Enzymes [BR:
sdp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NCTC12225_01556 (pbp2)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NCTC12225_01556 (pbp2)
Glycosyltransferases [BR:
sdp01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NCTC12225_01556 (pbp2)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdp01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NCTC12225_01556 (pbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF2463
DUF4854
DUF648
Motif
Other DBs
NCBI-ProteinID:
VED62928
LinkDB
All DBs
Position
1:complement(1559948..1562170)
Genome browser
AA seq
740 aa
AA seq
DB search
MTEKKGTSKQTKKKSGQKKNKNIKRMIIKVLSFLVLAFVILALLSVLLFAYYAWKAPAFN
ESKLQDPSPAKIYDKDDELVKTLDNGARREHVDLKDVPDTMKDAVLATEDNRFYDHGALD
YKRLFGAVLKNITGGFGSQGASTLTQQVVKRTFLTDQKSIERKAQEAYLSYRLEQEYSKD
EIFQMYLNKIYYSDGVYGIKAAARYYFDKDLKDLNLAESAYLAGLPQVPNTYNIYDHPEE
AEKRKDTVLYLMAYHHRISEKEKKEAQDTPITENLVQRTAEDRQIKPDDDSEQYNSYVNF
VKQELMNNPEFKGQNLSDILNSGIKIYTYMDKDAQNSLQNRIDNGGYYKNEDQMVGSTIV
DSQTGALVAISGGRNYKDVVERNQATDAHPTGSTLKPFLAYGPAIDNMQWATNHSIQDES
AYNINGATFRNYDQQSHGTVSIYDALRQSFNIPALKTWQQVKSQAGNNAPTDFAKKVGLE
YENTDIGPSEVLGGSSSEFSPTQLASAYASFANGGTYNKAHSIKKVVEANGNTIEFDFTS
HKAMNDYTAYMITEILKGTFEAYGSAYGNKVDGVNMAAKTGTGTYGAETYQQYNLPDSAA
KDVWISGFTPKYTMSVWMGFSEVKQYGQNSFVGSSEQKYPQLLFKDVMSDISPRDGSDFT
RPDSVAGSGKSLYVAKSPDGNTTSNFTESSNGTNIGSRSNNNRNGNNGQNLSNANNNSQQ
GNNNNSNNNGNGIFGNLFGR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaagaaagggacttctaagcaaacgaaaaagaagtccggtcaaaaaaagaat
aagaacatcaagcgtatgatcattaaagtgttgagctttttagtattagcatttgtcatc
ttagcactcttatctgtattgcttttcgcatattatgcctggaaagcaccggcatttaac
gagtctaaactccaagatccaagtccagcaaaaatttacgataaagatgatgaattagtt
aagacgcttgataatggtgcaagacgagaacatgtggatttaaaagatgttcccgatacg
atgaaagatgcagtacttgcaactgaagacaaccgtttttatgatcacggtgcactcgat
tacaaacgtttattcggtgccgtattgaaaaatattacgggcggctttggttcacaaggt
gcttcgacgctaacacaacaagtggttaaacgtacgtttttaacagaccaaaagtcgatt
gaacgtaaagcgcaagaagcctacttatcttatcgtttagaacaggaatattctaaagat
gaaattttccaaatgtatctcaacaaaatttactactctgatggtgtgtatgggattaag
gctgcagcaagatactacttcgataaagatttaaaagatttgaacttagctgaatcggcg
tatctcgcaggtctgccgcaagttcctaacacttataacatttatgaccatccagaagaa
gctgaaaaacgtaaagatacagtattgtacttgatggcatatcatcatcgcatttctgaa
aaagagaaaaaagaagcgcaagatacgccaatcactgagaatctcgtgcaacgtacagca
gaagatagacaaattaaaccagacgatgattcagaacaatacaattcttatgtgaacttt
gtgaagcaagagttgatgaacaatcctgaatttaaaggacaaaatttatctgacattctt
aacagtggtattaaaatttacacttacatggataaagatgctcaaaacagcttacaaaat
cgtattgataatggtggttattataaaaatgaagatcagatggtgggttcaacaatcgtg
gacagccaaactggtgctttagttgccatttcaggtggtcgtaactataaagatgtcgtt
gagcgtaaccaagcgactgacgcacatccaactggttcgacattgaagccattcttagct
tatggtccagcaattgacaacatgcaatgggcaaccaaccactctattcaagacgaatca
gcatacaatattaatggtgcaacctttagaaactatgaccaacaaagccatggtacggta
tccatttatgatgcattacgtcaaagttttaacattccagcattgaaaacatggcaacaa
gtcaaatctcaagctggtaacaatgcaccgacagattttgcgaaaaaagttggtttagag
tatgaaaatacagatattggaccttcagaagtattaggtggttcatcttctgaattctca
cctacgcaacttgcttcagcctatgcatcatttgcaaatggtggtacgtacaacaaagca
cattcaattaaaaaagttgtagaagcaaatggcaatacaattgaattcgattttacgagc
cataaagcaatgaatgactacacagcttatatgattactgagattttaaaaggtacattt
gaagcatacggttctgcttatggcaacaaagtcgatggtgtgaatatggctgctaaaaca
ggtacaggtacgtatggtgcagaaacatatcaacagtacaatttacctgattcagctgct
aaagacgtatggatctcaggcttcacaccgaaatatactatgtctgtatggatgggcttt
agtgaagtgaaacaatacggtcaaaactcattcgtcggcagtagtgaacaaaaatatccg
caattactctttaaagatgtaatgagcgatattagtccacgtgacggttcggactttaca
cgtccagactctgttgcaggtagcggtaagagcctgtatgttgcaaagtcacctgatggc
aatacaacaagtaactttactgaatcaagtaatgggacaaacattggttcacgttctaac
aacaacagaaatggcaacaacggtcagaatttgagcaatgccaataacaattcacaacaa
ggtaacaacaataacagcaataataacggtaatggtattttcggcaacttattcggtcgt
taa
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