Staphylococcus delphini: NCTC12225_01865
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Entry
NCTC12225_01865 CDS
T06587
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00470
D-Amino acid metabolism
sdp00550
Peptidoglycan biosynthesis
sdp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC12225_01865 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC12225_01865 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdp01011
]
NCTC12225_01865 (murD)
Enzymes [BR:
sdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NCTC12225_01865 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdp01011
]
Precursor biosynthesis
Amino acid ligase
NCTC12225_01865 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
Pyr_redox_3
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
VED63229
LinkDB
All DBs
Position
1:complement(1909536..1910885)
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AA seq
449 aa
AA seq
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MIHYTGLRGQKVLVIGMAKSGYEAAKLLHRLGAEVTVNDGNDLSNDAHAKDLEDLGINVV
SGAHPLALLDEAPIIFKNPGIPYTVPIIHEAQKQGLKILTEVELSYLISEAPIIGITGTN
GKTTVTSLIGDMFNKSRENGRLSGNIGFVASRVAQEVKADEYLVTELSSFQLLGIEHYRP
HIAIITNLYSAHLDYHENLGNYQNAKKRIFENQTESDYLIFNDKQRHLIDTSKIRAKILY
FSTQHRVDGIYVEKEYIVYNGVRLIHLDDIVLPGEHNLENILAAVMAAILAGVSMSAIVQ
SLSTFSGIVHRLQYIGNNKTNKYYNDSKATNTLATQFALSSFKQPIIWLCGGLDRGNGFD
ELIPYMNNVRVMVTFGETQDKFVKLGESQGKYVIRANDVTDAVTKVQDVIEPNDVVLLSP
ACASWDQYDTFEQRGERFIEAFRAHLPSH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgatacattatacagggcttagaggtcaaaaagtactcgttatcggcatggcgaaaagt
ggctatgaagcagcaaaattattacatcgtttaggcgctgaggtgacggtgaacgatggc
aatgatttatcaaacgatgctcacgcgaaagatttagaagacttaggtattaatgtcgtt
agtggtgcacatccgcttgcgttattagatgaggcaccgattattttcaaaaacccaggc
attccatacacagtccctattattcatgaagcacaaaagcaagggctaaaaattttaaca
gaagtagaattaagttatttaatttctgaagcaccgattataggcattaccggtacaaat
ggtaaaacgacagtgacatcattaattggtgacatgtttaacaaaagtcgcgaaaatggg
cgtttatcaggaaatattggtttcgtcgcatcgagagtcgcacaagaagtaaaggcagat
gagtatttggtgacggaattgtcgtcgttccaattgctcggtattgaacattatcgaccg
cacatcgcaatcattacgaacctttattcagcgcatttagattaccatgaaaatcttgga
aactatcaaaatgcgaaaaagcgtatttttgaaaatcaaacggaaagcgactatttaatt
ttcaatgataaacaaagacatctcatcgatacatcgaaaattcgtgctaaaattttatac
ttttcaacgcaacatcgtgttgacggtatttatgttgaaaaagagtatattgtttacaac
ggtgtacgtctcattcatttagatgatatcgtcctaccaggtgaacacaatttagaaaac
attttagcagcagtcatggcggcgattttagcaggggtgtccatgagtgctatcgtccaa
tcgttgtctacattttcaggcattgtacaccgtctacaatacatcggcaataacaaaacg
aataaatactacaatgattctaaagcaacgaacacattggcgacacaatttgcgttaagt
tcattcaagcaacctatcatttggttatgtggtggtttagaccgtgggaatggttttgac
gaactgattccttatatgaacaatgtgcgcgtaatggtgacgtttggtgaaacacaagat
aaatttgtgaagctaggcgagagtcaagggaagtatgtcattcgagcaaacgatgtgaca
gatgcagtgactaaagtccaagatgtcatcgaaccgaatgatgtcgtcttattatcgcct
gcttgtgcaagttgggatcaatacgataccttcgaacaacgtggagaacgttttattgaa
gctttcagagcacatttgccatcacattaa
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