Staphylococcus pseudintermedius ED99: SPSE_1111
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Entry
SPSE_1111 CDS
T02008
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPSE_1111 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdt03400
]
SPSE_1111 (mutM)
Enzymes [BR:
sdt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPSE_1111 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPSE_1111 (mutM)
DNA repair and recombination proteins [BR:
sdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPSE_1111 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TOP1_ZnF
Zn_Tnp_IS91
zinc-ribbons_6
NFACT_N
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
ADX76384
LinkDB
All DBs
Position
1146638..1147510
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AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGITPHIMHQKVIDVTFSEPVKRGKLEGKETIIKGIDLDAFVKYTVGFE
IADVQRRSKYILFRIENGNVERILISHLGMAGAFFVVQSLDDIAIPNFRKHWQVVFHLEN
GIKLVYSDIRRFGEIRNVESLEAYPSILEIAPEPFEQEALAYYLAKSDEKKYLNKAIKPF
ILDHRVISGCGNIYACEALFDAQIHPEKKVKDLSIAEKTKLFNSVVKVLEMGILNGGTSV
ADYVHADGQRGTMQDHLKVYKQKRCATCETAIETVIISGRNTHFCPNCQS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtcgaacatgtcaaacgtgggattacgccgcatattatgcac
caaaaggttatagatgtgacgttttctgaacctgtcaaacgcggcaagttagaagggaaa
gaaacgataattaaagggattgaccttgatgcttttgtgaagtatacggtcggttttgag
attgctgatgtgcaacgccgcagtaaatatattttatttcgtatcgaaaatgggaatgtt
gaacgtatattaatttctcatttagggatggcaggtgcattctttgtcgtgcaatcgctc
gatgacattgcgataccgaattttcgaaagcattggcaagttgtttttcatttagaaaat
ggtattaaattagtctattcagatattcgccggtttggtgagattcggaatgtcgaaagt
ttagaggcttacccatcaattttagagattgcacctgaaccttttgaacaagaggcgtta
gcctattatcttgctaaaagtgatgaaaagaaatatttaaacaaagcgattaaacccttt
atactggatcatcgtgtgatatcgggttgtggcaatatttatgcgtgtgaagcgctgttt
gatgcacaaattcatccggagaaaaaagtaaaagacttgtcaatagcggaaaagacaaag
ttatttaatagtgtagtaaaagttttagaaatgggtattttaaatggtgggacaagtgtg
gcagattatgtacatgcagatggtcaaagaggtactatgcaagatcatttgaaagtatat
aaacaaaagcgctgtgcaacgtgtgaaacagcgattgaaacggttattatttcaggacga
aatacacatttttgtccaaattgccaaagttag
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