Seriola dumerili (greater amberjack): 111216519
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Entry
111216519 CDS
T05606
Name
(RefSeq) uncharacterized protein LOC111216519
KO
K17386
platelet-derived growth factor subunit B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
sdu04510
Focal adhesion
sdu04540
Gap junction
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111216519
04020 Calcium signaling pathway
111216519
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111216519
04540 Gap junction
111216519
09142 Cell motility
04810 Regulation of actin cytoskeleton
111216519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sdu04052
]
111216519
00536 Glycosaminoglycan binding proteins [BR:
sdu00536
]
111216519
Cytokines and neuropeptides [BR:
sdu04052
]
Cytokines
Growth factors (RTK binding)
111216519
Glycosaminoglycan binding proteins [BR:
sdu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
111216519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
111216519
NCBI-ProteinID:
XP_022593767
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MRSWVLLLLLAALSAARLRLGSAESDPLPPSLVDLVRNSPISSVDDLKLLLQQETNAIDE
EEDEHDILTNHTHGRYTRSLVEAQPAQQAACKVRTEVMEVTRSMLDRRNANFMLWPPCVE
VQRCSGCCNTRLLQCVPTVTSSRYLQVIKIQYINRKARYDKAIISVEDHVSCRCQAATSS
SSSSSSSSPSLPITHSSIQSNPNPPAPPPQQPPPSSHHPLPLPRSVHPAPPKTHASKADL
HRHDDLKHNQQHYSPEEREPVARQWQQGSYTQLVHWTQPRVHQPIIGVLGSVSSRPSEAR
AEHSVMGSTQQVGHGSGYDGSREEGSVHVAHSGGEAHHPDHTQRQQQVLQHQQRQQYQQQ
YHHQPHYPQQFNHGGVEDQELGAQYRLNAPQSDGASPPVSPTQPSILEQNPTPPLTTNQK
DSVTSQKNTEVTSHKQTEAETVSQKEGNEREDSGSASSGDLAGAKLANQGKEKDSNVTRG
DGHLTEEERRQKLLEMVQREPDRQTPLHPHHPQQRPKPTAFKTALYTVAPISASARQAPF
RPASPRRRRKHRKRISKAAIRAMIM
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctgctgctgctgctggctgcgctctcagcggcccgtctgcggctc
ggcagcgctgagagcgaccctctccctccgtcgctggtcgacctggtgaggaactctccc
atctcctctgtggacgacctgaagctgctgctgcagcaggagaccaatgcaatagatgag
gaagaagatgagcatgatattctcacaaaccacacccatggccgatacactagaagtctt
gtggaggcgcagccggcccagcaggcggcctgtaaagttcggacggaggtgatggaggtg
acgaggtccatgctggaccgccgcaacgccaacttcatgctgtggccgccctgcgtggag
gtgcagaggtgttcgggctgctgcaacacgaggctcctgcagtgcgtccccaccgtcacc
tccagcagatacctgcaggtgataaagatccagtacatcaacaggaaagcccgctacgac
aaagccatcatctcagtggaagatcacgtcagctgcaggtgccaagccgccacgtcttcc
tcgtcctcttcatcttcttcctccccatcacttcccatcacgcactcttccattcagagc
aaccccaacccccctgcacctccgccacagcagcctcccccatcctcccaccatcccctg
ccccttccccgatccgttcacccagccccgcccaagactcacgcctccaaggccgacctc
catcgccacgatgacctgaagcacaaccagcagcactacagtcctgaggagcgtgagccg
gtggcaaggcagtggcagcagggcagctacacccagctggtgcactggacacagcccagg
gtgcaccagccgatcatcggggtgctcgggtccgtcagcagcaggccgtcggaggcaagg
gcggagcacagtgtcatgggaagtacgcagcaggtcgggcacgggagcgggtatgacggg
agcagggaggaaggcagcgtgcacgtagcgcacagtggcggtgaagcgcatcatcccgat
cacacacagaggcagcagcaggtgctgcagcatcagcagagacagcagtatcagcagcaa
tatcatcaccagccgcattatccacagcagttcaaccacggaggggtggaggaccaagag
ctgggggcgcagtatcgactcaacgccccccagtcggacggcgcctccccacccgtcagc
ccaacccagccatccatattagaacaaaaccccacccctcctctaaccaccaaccagaaa
gactcagtgaccagccaaaagaatacagaggtcacaagtcacaaacagactgaggctgaa
acagtcagtcagaaagaagggaacgagagggaggacagtgggtcagccagtagcggggac
ttggctggtgcgaagctggccaatcaggggaaggaaaaagactctaatgtgaccagagga
gatggtcatttgacagaggaggagaggaggcagaaactactggagatggtacagagggaa
ccggatagacagactcctcttcatcctcatcatccacagcaaagaccaaagcccaccgca
tttaaaacagccctctataccgtggctcccatctccgcctctgcacgtcaggccccgttc
cgtccggcctcgcctcggcgcaggaggaaacaccgcaaacgcatcagcaaagcagccatc
agagccatgatcatgtag
DBGET
integrated database retrieval system
