Seriola dumerili (greater amberjack): 111218469
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Entry
111218469 CDS
T05606
Symbol
chpf
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sdu01100
Metabolic pathways
Module
sdu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
111218469 (chpf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdu01003
]
111218469 (chpf)
Enzymes [BR:
sdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
111218469 (chpf)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
111218469 (chpf)
Glycosyltransferases [BR:
sdu01003
]
Glycan extension
O-Glycan
111218469 (chpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
111218469
NCBI-ProteinID:
XP_022596517
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MRFSAFISVLRSVGPVVIGISLGFTLSLLSVNWSEEACYLDGKQSEDVTLGQDGLLKGAR
KPNSISTLNDVESEEDFEPRIVPYKQVQQSAPKKVFRARYISTELGMRERLFVGVLTSKN
TINTMGIAVNRTISHHLDSVIFFTGMRNRKVPHGMFVVSHGDERLIWNMFQTIRYILDHY
INEYDWFYFVQDDTYTEADRIKALVDHLSMDRELYMGSPEEFIGGEMEGKYCYGGFGYVV
SRTLLLRLQPFLENCRNDILSARPDEWLGRCIIDYTNTNCVSEYEGLQYHHYELGKNSDP
SKEQSEHFKNALTVHPVSDPEQMYRLHRYFTEIELQKIYDEIAKLQAEIKNVSVVAFEGN
RSAQWPVGINPPFEPKTRFEVLKWEYFTEEEIYSCIDGSPKCELHGIDRMDVADVIDTAV
GELNKKYKPVLHLKKQQLINGYRRFDPIRGMEYTLDLQLEVVNQKGHSRSITKRVHLVRP
LSQIEIIPMPYVTEATRVHIIIPLTLQDRNYVDHFLEVFASNAFETSENAILTFLFIYDP
VEAQQVNQNDIFASVKTQINAYERKYPTVKIPWISVKTETPSQIKFMDIISKKHPVDTLF
FLASVNTNINSEFLNRCRMNSINNWQVFFPIHFQDYNPDVAYHNQPHPATIDLVKDAGHF
DRRSFEESCFYNSDYMATRTRMVADVQENEEILETMDIYDMFVKYSGLHVFRAVEPALHQ
QYRYQACNPRLSEDIYHRCVQSNLEGLGSRSQLAMLLFEQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagattttcagcgtttatttctgtcctgcggtcggtcggcccggtggtaatcggtatt
tctttagggttcacgttgagtttattgagtgtaaactggtcggaagaagcgtgttatcta
gacggtaaacagagtgaggatgtgactttgggtcaggatggactgctcaaaggagcccga
aagcctaactccatttcgactctcaacgatgtggagtccgaggaggattttgaaccaaga
atagtcccatataaacaagtccaacagagtgctccgaagaaagttttcagggctagatac
ataagcacagagttggggatgcgagagcgtctgtttgttggggtcctgacatccaaaaac
accattaacaccatgggcatagctgtcaatcgcaccattagccatcacctggactccgta
atcttcttcaccggcatgcgaaaccgcaaagtccctcacggcatgtttgtggtctctcat
ggagacgagagactgatatggaacatgtttcagaccatcagatacattttagaccactac
atcaatgaatacgactggttttactttgtccaagatgacacctacacagaagctgacagg
atcaaagccctggtggatcacctgagtatggatcgagaactttacatgggcagtcctgag
gagttcataggtggggagatggaagggaagtattgctacggagggttcgggtacgttgtg
tcacgtaccttgctcctgcgactccagcccttcttggaaaactgtaggaacgatatcctc
agtgccaggcctgatgagtggctcgggagatgcatcattgattacacaaacacaaactgt
gtcagcgaatatgaggggcttcagtaccaccattatgagttgggaaaaaactctgatcca
agtaaggagcagagtgaacattttaagaatgctctgaccgtccatccagtgtctgaccct
gagcagatgtatcggctgcacagatacttcactgagattgaactccagaagatttacgat
gagattgctaagctgcaggcagaaataaagaatgtgagtgtggttgcttttgaaggcaac
cgaagtgcccagtggccagttgggatcaatccaccttttgagcccaaaactcgatttgaa
gttctgaagtgggaatactttacagaggaagagatatattcatgcattgatggctctccc
aagtgtgagctgcacggcattgatcgaatggatgtggccgatgtcattgacaccgccgta
ggagagctgaacaagaagtacaagcccgtcttacacctgaagaagcagcagctgattaat
ggctacaggcgctttgaccccatcaggggcatggagtacaccttggatcttcagctggag
gtggttaatcagaaaggtcacagccgttccatcaccaagagggttcatctggtgcgacct
ttgagccaaatagagataattcccatgccctatgtcacagaagctacaagggttcacatc
attatacctcttactctgcaggaccggaactatgttgaccatttcctcgaagtctttgcc
tcaaatgcctttgagaccagcgaaaatgctatcctaacattcttgtttatttatgaccca
gtggaagcacagcaggttaaccagaatgatatatttgccagtgtgaagactcagattaat
gcttatgaacggaaataccccacagtgaaaatcccatggataagtgtcaagacagaaaca
ccatcccagataaagttcatggacatcatctcgaagaaacacccagtcgacacgctgttc
ttcttggctagcgtcaacacaaatatcaattctgaatttctgaaccgttgccgcatgaat
tccataaacaactggcaggtgttcttccccatccatttccaggactataaccccgatgtg
gcctatcacaaccagccacatccagccacaattgatctggtcaaggatgcaggccatttt
gaccgcaggtcatttgaagagtcatgtttttacaactcggactacatggcaacgcgcaca
cgaatggtggcagacgtccaagagaatgaggagattctagagacaatggacatctacgac
atgttcgtaaaatattccggtctgcacgtattcagagcagtagagccagcattgcaccag
cagtatcgctaccaagcctgcaacccacgactcagtgaggacatctatcatagatgtgtt
cagagcaacttggaaggtcttggttctcgttcccagctcgccatgctgctgtttgagcaa
gaacaaggaaacagcacttga
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