Seriola dumerili (greater amberjack): 111229237
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Entry
111229237 CDS
T05606
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111229237
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111229237
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111229237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RED_N
Motif
Other DBs
NCBI-GeneID:
111229237
NCBI-ProteinID:
XP_022611198
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MRGGSSYGDRDRDRGRDRPRFGTMSGRGGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
AEHPEVQRISQYELEEYRRKKEITIRGSGCPKPVTAFHQAQFPQYVMDVLMQQNFKEPTA
IQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLREYVQ
INVGALELSANHNILQIVDVCMETEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLQEARQAINPKLLQLVDSGR
GAGGGGRMRYRGSNSNNPNLMYQEECDRRMRSGGGGGGSKDNRSGFSRDSRNSRDGDRST
SSSSSSYRDRSRDRRNSYNSGSDQYQSYSGSGGYNSRSGGQSAGGGGQDQSSQPQGQFGQ
LLPPPPPGGPQPLMAQQFAPPQAPLMGFMGPPPYPFASPPPPPPGPPPPRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggttcgtcctatggagacagagacagggaccgtggacgagacaggccacgg
ttcgggaccatgagtggtcgcggtggaccccccccaatgaagtttgggaatccaggtgag
cgtctccgcaagaaaaggtggaacctggacgagctgccaaaatttgagaagaacttctat
gccgaacaccctgaggtccaacgcatcagtcagtatgaattggaagagtatcgcaggaag
aaggagatcaccatcagaggctctggctgtccaaaaccggtcaccgcttttcaccaggcg
cagtttcctcagtatgtgatggatgtgctgatgcagcagaactttaaggaacccacagcg
attcagtctcagggtttccctgtggccctgagcggcaaggacatggtgggaatcgcacag
actggctctggaaagacactggcttatctgcttcctgctattgtgcacatcaaccatcag
ccctatctggagaggggagatggtcccatttgtctggtgctggccccgaccagagagctg
gctcagcaggttcaacaggttgcatatgagtatggcaagtcttctcgtatcaaaagcacc
tgtgtctatggtggagcacccaaaggaccacagattcgagatcttgagaggggtgttgag
atctgcatcgccacacctggtcgtcttattgacttcttggaggtgggaaagacgaacctg
cgtcgctgcacctacctcgtgctggatgaggctgaccgcatgctggacatgggctttgag
ccacaaattcgcaagatagttgaacaaatcaggcctgacagacagactctgatgtggagt
gcaacctggccaaaggaggttcggcagcttgctgaggacttcctgagggagtatgtccag
attaatgttggtgctctggagctcagtgccaaccacaacatcttgcaaatagtcgacgtc
tgcatggagactgaaaaggacaacaaacttattcagctgatggaggaaattatggctgaa
aaggaaaacaaaaccatcatctttgtagagaccaagaagcgttgtgatgatcttaccagg
agaatgaggcgggacgggtggccagccatgtgtatccatggagacaagagccagccagaa
agagactgggtgctcacagaatttcggagtggcaaagctcctatcctgattgctactgat
gtcgcctcgcgtggtctggacgtggaagatgtcaagttcgtcatcaactatgactatccc
aactcctctgaagattacgtccaccgtatcgggcgtacggcccgtagtaccaacaaaggc
actgcctacaccttcttcaccccagggaacctgcggcaggcccgagaccttgtccgggtg
ttacaggaggcccggcaggccatcaacccaaaactgcttcagcttgtggactcgggccgt
ggtgcaggaggaggtggcagaatgcgttaccgtggcagcaactccaacaaccctaaccta
atgtaccaggaagagtgtgatcgccgcatgcgctctggtggaggtggtggtggcagcaaa
gacaaccgcagcggcttcagccgtgacagccgcaacagccgcgatggagaccgctccact
tcctcctcctcttcctcatacagggacagaagtcgggatcgcaggaacagttacaactcg
ggctcagatcagtaccagagttacagtggcagcgggggctacaactcccgcagcggtggc
cagtctgctggcggtggaggtcaggatcagtctagccagccacagggtcagtttggccag
cttcttcctcctccgccaccaggtgggccgcagcccctcatggcgcagcagtttgctcca
ccacaggccccgctaatgggcttcatggggccaccaccgtacccttttgcctcaccgccc
cctcctcctccaggccctccacccccccggaagtag
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