Seriola dumerili (greater amberjack): 111236171
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Entry
111236171 CDS
T05606
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111236171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
111236171
NCBI-ProteinID:
XP_022620542
LinkDB
All DBs
Position
Unknown
AA seq
2480 aa
AA seq
DB search
MYRFFVRLTFLIPAIVISQGLKCSLPTESCLNGGRCEATSNGNGECKCPSDYVGSRCQYP
SPCSPSPCRNGGECRPVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLI
TLTAYRCRCPPGWSGKTCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDIN
ECAQTPSPCLNGGVCVNEVGSYHCRCPQEYTGQHCETTYMPCSPSPCQNGGTCVQKGDTT
YDCSCLPGFTGQHCEHNIDDCPGHNCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHINTDECASQPCLNNGKCIDKINSFHCECPKGFSGSLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCETDINECYSDPCHYGICKDGLASFTCYCHPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICSCPKGTTGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGAMCNINIDECAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPRPCKN
GGVCKESEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAICINTMGGYQCKCQPGYS
GQKCETDIDDCKPNPCSNGGLCHDGINSFTCTCLPGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGTCLDSYGTYKCTCPHGYTGVNCQNLVRWCDSFPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVSHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCNPSSDPLTNEPKCFNNGKCVDRVGGYQCVCPPGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDRVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQITPDAPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHISPEQLKNRSSTFLRELSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSADGWPEWASMPANVLGQVKERVSAMVSQRKRRELDPVQVKGSVVY
LEIDNRQCYQQSTECFQSATDVAAFLGALATSGNLNVPYIEAVTSVRPTPSSSELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLKPMKN
SDINLMDDNQNEWGDEDPDCRRFRFEEQAMLDLSDHTDHRKWTQQHLDAADLRIPSIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADANATDDSGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPLFLAAREGSYETAKVLLEHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHSAPLSTSSLSPPLCSPNDYLSNLKPTLSAKKVRKI
SSGGKGGKDGGKDNRMKKKKSLDGKSNLLDTSAVLSPVDSLESPHGYLSDVASPPMTSPF
QQSPPMSLNHLQGNGDSHMGQMSMGKDMGCMSFDPNPPRLSHLPVSSPSSQGTSSIGGSR
GGQCDWVSRMHPGVGQQGSFTQAPPISHNMMGPLHGVSTATLSQIMGYQNLQTSHLSSPA
HMMQQAHSRQLQHQNSNSTTAGQSLNQSFANVELNGSDMQQNNSSGRSMPIHTVMPQETQ
ILGTQFLTPPSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEG
ISSPPTSIHSQMNLIPDQFK
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgagactaacatttctgattcctgcaatcgtcatctcacaaggt
ctaaaatgctccctacccactgaatcatgcctgaatggaggaagatgtgaagccacctct
aatggaaatggagaatgcaagtgtcccagtgactacgtaggcagtcggtgccagtaccca
agcccctgcagcccttcaccctgccgcaacggtggtgaatgccgccctgtttcccatggc
aacacgtttgatttccgctgcgtgtgccgcctgggtttcaccgaccggctgtgcctgacc
cccaccaaccacgcctgcatgagctccccctgtcgcaatggaggaacctgtgatctcatt
accctgactgcctaccgctgccgctgcccacctgggtggtcaggcaaaacatgccagctt
gccaacccatgtgcttccaacccatgtgcaaacggtggccagtgctcagcctttgattcc
acctacatctgcacctgcccacctgcttttcacggtcaaacctgcaaacaagacatcaac
gagtgtgctcagactccctctccctgtctcaacggcggcgtgtgcgtgaacgaggtgggc
tcataccactgccgctgtccgcaggagtataccggccaacactgcgagaccacctacatg
ccatgcagtccttcaccatgccagaatggaggcacttgcgtgcagaagggagacaccacc
tatgactgtagctgcctgccaggcttcacaggtcagcactgtgagcataacatcgatgac
tgtccaggtcacaactgccagaatggtggtgtgtgtgtagatggtgtgaacacctataac
tgccagtgtccacctcattacacaggtcagtactgcacagaaaatgtggacgagtgtgag
ttgatgcccaatgcgtgccagaatggtggaacctgccatgacactcacggcagctatcac
tgcgtctgcgtcaatgggtggacaggcgacgactgcagcgagaacatcgacgactgcgcc
agtgctgcttgttaccacggtgcgacctgccacgaccgcgtagcttccttcttctgcgag
tgtcctcacggtcgcacaggtttgctgtgccacctggatgacgcctgtatcagcaacccg
tgtcaaaagggctccaactgtgacaccaacccagtcaatggcaaggcaatctgcacctgc
cccccaggttacactgggtcagcctgcaacctggacattgatgagtgctccctcggtgcc
aacccttgcgaacatggtggtcgctgcctcaacaccaaaggctctttccagtgtaagtgt
cttcaaggatatgaaggtcctcgctgtgaaatggacgtcaatgaatgcatgtctaatcct
tgccacaatgatgccacctgtctggaccagatcggagggttccactgcatctgtatgcca
ggatatgagggtgtgttctgccacatcaacaccgatgagtgtgccagccaaccatgtctc
aacaatggcaagtgcatcgacaagatcaactccttccactgcgagtgccccaaaggtttc
tcggggagtctgtgtcaggtggacattgatgaatgtgccagcaccccctgcaagaatgga
gcaaagtgtacagatggtcccaacaagtacacctgtgaatgtgctgaaggttacacaggg
cagcactgtgagaccgacatcaatgaatgctactctgacccctgccactacggcatctgt
aaggatggcctggcttccttcacttgctactgccaccctggctataccggccgactgtgt
gagaccaacatcaacgagtgtctgagccagccctgcaagaacggtggtacttgccaggac
agggagaacacatatatctgttcctgccccaaaggcactacaggtttcaactgtgaggta
aacctggacgactgcaagagcaaaccctgcgactacggcagatgcattgacaaaatcaac
ggctacgagtgtgcgtgtgagccgggctacacaggagcaatgtgtaacatcaacatcgat
gagtgtgccatcaacccctgtcacaatgggggcacatgcgtcgatggcatcaacagcttc
acttgcctgtgcccagaggggtacaacgacgccacctgtttgtctcaggtggacgagtgt
ggcagcaacccctgcatccatggccgatgccaggacctcatcaatggttacaaatgtacc
tgtgactctggatggagcgggccaaactgtgacatcaataacaacgagtgcgagtccaac
ccgtgcatgaacgggggaacgtgcaaggacatgacaagcggttaccactgcacatgcaga
gccggcttcactggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctcaaccagggcacctgcatcgatgatgtggctggatacaagtgcaactgtttgctgccc
tacactggtgaaaactgtgagaccctgctggccccctgcagccccagaccctgtaaaaat
ggtggcgtatgtaaggagtctgaagactaccagagcttctcctgcatctgccctgaagga
tggcaaggtcaaacatgtgagattgatatcaacgaatgtgtgaagagcccatgccgcaat
ggtgctatttgcattaacactatgggtggctaccagtgcaagtgccagccaggttactct
ggccagaagtgtgagacagacattgatgactgcaaaccaaatccctgcagtaatggtggt
ctgtgccacgatggcatcaacagtttcacatgtacctgtctgcctgggtttcgtggtggc
agatgtgagcaggacataaacgagtgtgagagtaacccatgtagaaatggagccaactgc
acggattgtgtcaacagctacacctgcacctgtccacctggcttcagtggcatcaactgt
gagatcaacaccaacgactgcactgacagctcttgcttcaatggtggcacttgcgtggat
ggaatcaatgcattcacctgcctgtgcctccccggcttcactggcagctactgccagtac
gacatcaacgagtgtgactccaagccctgcctcaatggaggaacttgtcttgacagttat
gggacgtacaagtgcacctgtcctcatggctatacaggagtcaactgtcagaatcttgtg
cgctggtgtgactctttcccctgtaaaaatggaggttcctgctggcagcagggagcctct
tatacttgccagtgccagactggatggactggcctctattgtgacatccccagtgtgtcc
tgcgaggtagcagccaaacagcaaggtgtggaggtgagccacctgtgcaggaactcaggc
cagtgcctggatgctggaaacacacattactgccgctgccaggctggctacactgggagt
tactgccaggagcaagtagatgagtgctcacccaatccctgccagaatggagccacctgt
actgattatctgggaggctacagttgtgagtgtgtccccggctaccatggtgtaaactgc
tccaaagagatcaatgaatgtcaatctcagccctgtcagaatggaggcacctgcatcgac
ctcatcaacacgtacaagtgctcctgtcccagaggaacacagggtgtccactgtgagata
aatttggatgactgcaacccctccagtgacccactgaccaacgagcccaagtgcttcaac
aatggcaagtgtgtggaccgcgttggaggctaccaatgtgtgtgcccaccgggttacgta
ggcgagcgctgtgaaggtgatgtcaacgaatgtttgtcagacccctgtgaccccagaggg
tcctacaactgcattcagctcaccaacagctaccgctgcgaatgccgcactggatataca
ggtcagcgctgtgatagagtgtttgatggctgcaaaggaagaccctgcagaaatggaggg
acgtgtgctgttgccagtaacacacctcatggtttcatctgcaaatgccctcccggcttc
actggctcttcttgtgagtatgattctcgctcctgtgggagtctgaattgcaggaacgga
ggtacgtgtgtgtcaggccacctaggcccacgctgcctgtgtccgccaaccttcactgga
cctgagtgccagacccccaccgacagcctctgcatctccaacccctgctacaacggagga
acgtgccagatcactccagacgcgcctttcttccagtgcagctgccccagcaatttcaac
ggcctgctgtgtcacatcctggactattcctttgtcggaggttttggacgagacatcacg
ccgcctccggaagtggaggtgagctgtgagattcctcagtgtgacgagtgggcgggcaac
cacatctgtgattcgctgtgcaacaaccatgcttgtggttgggatggaggagactgctcg
ctgaattttgatgatccgtggcaaaactgctctgctgccctgcagtgctggcgatacttc
aacgatgggaagtgtgatggccagtgcaacagccctggatgcctttatgatggttttgat
tgccaaggacaggaaggacaatgcaacccactgtatgaccagtactgtaaagaccactac
gccgacggtcactgtgaccagggctgcaacaatgcagaatgtgaatgggacggtctggac
tgtgccaacaacatgccagagaagctagcagacgggcacttagttctggtggtccatatt
tccccagaacaacttaagaatcgttcttctaccttcctcagagagctcagcagcgtcctc
cacaccaacgtcgtgttccgtcgtgatgccaaaggagaaccaatgatctttccttactac
ggcaatgagcaggacctggttaagcataacgtgctgaagcgctctgcagatggctggccc
gagtgggcttcgatgccagccaatgttttgggtcaggtgaaggagcgtgtgtctgccatg
gtcagccaacggaaacgcagagagctggatcctgtgcaggtcaaagggtctgtggtgtac
ctggaaattgacaaccgtcagtgctaccagcagtctactgagtgtttccagagcgcgaca
gatgttgctgcattccttggagcactggccaccagtgggaatctcaatgtgccctatatt
gaagctgtcacaagtgtgagaccaactccctcctcttcagagctctaccccatgtatgtt
gtattcttgggcttggctgctttgggtttcatctgcctgggtgttttggtgtctcgtaag
cggcgacgagagcatggccagctctggttcccagagggattcaaagtgtcagagcccagc
aaaaagaaacgcagagagccgctgggagaggattctgttgggctgaagcctatgaaaaac
tcagacatcaatcttatggatgacaatcaaaatgaatggggtgatgaggatccagactgc
aggcgcttcaggtttgaggagcaggccatgttggatttgagtgaccacactgaccatagg
aaatggacacagcagcacctggacgcagccgacctacgtattccatccattgctcctacg
cctcctcagggagagatagagaatgactgcatggatgtcaatgtcaggggaccagatggt
ttcacccccctgatgatcgcctcctgcagcggcggaggactggagactggtaacagtgaa
gaggaagaagatccctcagcagaaatcatctctgacttcatttaccagggcgccaacctc
cacaaccagactgaccgcacgggtgagactgccctccacctggctgctcggtacgcccgc
tcagatgctgccaaacgcctcctggagtccagcgccgatgccaacgttcaagacaacatg
ggccgcactccgcttcacgccgctgtggcagcagatgcacagggagtgttccagattttg
atccgaaaccgcgccactgatcttgacgcccgcatgcatgacggaacaacgccgctgatt
ctggctgcccgattggcggttgagggaatggtggaagagcttatcaactgccacgccgat
gctaacgccacagatgattctggtaagtctgctcttcactgggccgcggctgtaaacaat
gtagaggctgccatggtgctgctgaaaaatggtgccaacaaagacatgcaagacaacaag
gaagagacaccactcttccttgcagcccgtgaaggcagctacgagacagccaaggttctt
ctggagcacttcgccaatcgtgagatcactgaccatctcgaccagctgcccagagatatc
gcccaggaacgcatgcatcacgacattgtccgcctcctggatgagtacaatgtggtcagg
agtcctgggcttcacagcgcccccttaagcacctccagcctctctccacctctctgctca
cccaatgactaccttagcaacctcaagcccactctttctgccaagaaggttcgcaaaatt
agctctgggggaaaaggagggaaggatggaggcaaagataatagaatgaagaagaaaaag
tctctggatgggaagagcaatttgttggacacatcagctgtcctttccccggttgattcc
ctcgagtcaccacatggctacctgtctgatgtggcctctcctcccatgacgtcacctttc
cagcagtccccacctatgtctctaaatcacctacaaggcaatggtgactcccatatgggc
cagatgagcatgggtaaggatatgggctgtatgtctttcgaccctaacccaccccgtctc
tctcacctgcctgtgtccagccccagtagtcagggcacatcatccataggtggaagcaga
ggaggccaatgtgactgggtctccaggatgcacccaggtgtaggccagcagggaagtttc
acgcaagcgccacctatttcccacaacatgatgggccctctgcacggcgtcagcactgcc
actctgtctcagatcatgggctaccagaatctgcagacaagccacctcagctcgcccgcg
cacatgatgcagcaggctcattctcggcagctccagcaccagaactccaactccaccaca
gctggtcagtccctcaaccagagcttcgctaacgtcgagctgaacggctccgacatgcag
caaaacaacagctcgggccgctctatgcccatccacactgtgatgccgcaggagacgcag
atcctcggcacccagtttctcacccctccctcccagcacagctactctggccccatggac
aacacacctaaccaccagctacaggtccccgaccacccatttctaactccctcccccggc
tcccccgaccagtggtccagctcatccccacattccaacatgtctgattggtcagaaggc
atctccagcccgcctacaagtatccattcacagatgaatctgatcccagaccaatttaag
tag
DBGET
integrated database retrieval system
