Sulfitobacter dubius: R1T39_00490
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Entry
R1T39_00490 CDS
T09506
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sdub
Sulfitobacter dubius
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdub03009
]
R1T39_00490
Enzymes [BR:
sdub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
R1T39_00490
Ribosome biogenesis [BR:
sdub03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R1T39_00490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Rota_NS35_N
DUF1930
Motif
Other DBs
NCBI-ProteinID:
WOI30627
LinkDB
All DBs
Position
96807..97853
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AA seq
348 aa
AA seq
DB search
MSHRRIDFILGESPPARLDKALARDVPEEANLSRTRLGRLIEEGAVTVDGAVVQDPRAKV
AEGQVVHISVEEAAESHILPEDIPLSVVFEDDDLIVIDKPAGMVVHPAPGSPSGTLVNAL
LAHCGDDLSGVGGMKRPGIVHRIDKDTTGLLVVAKSDAAHHGLAAQFEKHTVERYYQTLV
YGVPDANDPRLRGVKGASFEAGNILRMTTQLARHKTDRQRQAVLFQGGRHAVTRARTVER
FGTPPVLALLECWLETGRTHQIRVHMSHAGHGLVGDATYGGRRKLAKAALPEATAEAIRA
FPRQALHAAVLGFEHPVTGENLRFEAPLPPDMAALLQLLREGPVDPSA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccgccgcattgatttcattctgggcgaaagcccgcccgcccgtcttgataag
gcgctggcccgcgatgtgccagaggaagcgaacctgtcgcgcacgcgattgggccggttg
atcgaagaaggagccgtgaccgtggacggtgcagtggtgcaagacccccgcgccaaggtg
gccgaaggtcaggtggtgcatatctccgttgaggaagcggcggaaagccatatcttgccc
gaggatattcccctgtcggtggtgttcgaagatgacgacctaatcgtgatcgacaaacct
gccggcatggtggtgcatcccgcgccgggctcgccatcgggcactttggttaatgcattg
cttgcacattgcggcgacgatctttcgggtgtgggcggcatgaaacggcccggtatcgtg
caccgcattgataaggataccaccgggctgctggttgtcgccaaatccgacgcggcgcat
catgggctggcggcgcagttcgagaaacatacggttgagcggtattaccaaacgcttgtc
tacggtgtgccggatgccaatgacccgcgtctgcgcggtgttaagggcgcatcctttgag
gcgggaaacatcctgcgtatgaccacccaactggcgcggcataagaccgatcggcagcga
caggcggtgctgttccaaggcggccgccacgccgtaacccgcgcccgcacggttgagcgt
tttggcacgccacccgttctggcactgctggaatgctggctggaaacggggcgcacgcac
cagatccgcgtgcatatgtctcacgcgggccacggtttggtgggggatgcgacctatggc
gggcggcgcaagctggccaaagcggccttgcccgaggccaccgccgaggccattcgcgcc
tttccgcgtcaggcacttcacgcggctgtcttggggtttgagcatcctgtgacgggcgaa
aacctgcgttttgaagccccgctaccgccggatatggcagcgctgcttcaactgctgcgt
gaggggcctgtcgacccttcggcgtga
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