Sulfitobacter dubius: R1T39_12280
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Entry
R1T39_12280 CDS
T09506
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R1T39_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdub03400
]
R1T39_12280
Enzymes [BR:
sdub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
R1T39_12280
DNA repair and recombination proteins [BR:
sdub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
R1T39_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WOI28458
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All DBs
Position
2465855..2466643
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AA seq
262 aa
AA seq
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MSFSLATWNINSVRLREPLVLKLLAEHGPDVLCLQECKSPVDKIPVEAFKAAGYTHMVAR
GQKGYNGVAILSKLPLLDAGDQDFAMLGHARHVAAKQENGTTIHNFYVPAGGDKPDREIN
EKFGQKLDYLSEMRDWFHSEKPKKSILVGDLNIAPREDDVWDHKKLLKIVSHTPVEVEAL
GAVQDAGNWIDITRQDVPTGNLYSWWSYRAADWDAADKGRRLDHIWATSDIAQAGHSSHI
VRDARGWEKPSDHAPVFASFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttccctcgccacttggaacatcaactccgtccgcctgcgcgagcctttggtg
ctgaaactgctggccgaacacgggccggatgtgctgtgcctgcaagagtgcaaaagcccg
gtcgataaaatcccggtcgaggcgttcaaggcggctggctatacgcacatggtggcgcgc
ggtcagaagggctacaacggcgtggcgatcctgtcgaagctgcctctgctggacgcagga
gatcaggatttcgccatgttgggccatgcccgccatgtggcggccaagcaggaaaacggc
accacgatccacaacttctacgtccccgctggcggtgacaaacccgaccgcgagatcaat
gagaagtttggacaaaagctcgactacctctcggaaatgcgcgactggtttcatagtgaa
aagcccaagaagtcgatccttgtgggtgatctgaacatcgccccgcgtgaggatgacgtc
tgggaccacaagaagctgttgaagatcgtcagccacaccccggtggaggtcgaagcgctt
ggcgcggtgcaggatgcgggcaattggatcgacatcacccggcaggacgtgccgacgggc
aatctttatagctggtggtcctaccgcgccgccgattgggacgccgctgataagggccgc
aggctcgatcacatctgggccacctctgatatcgcacaggccggacactccagccatatc
gtccgcgatgcacgcggttgggagaaacctagcgaccacgcaccggtttttgccagtttt
gacctttga
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