Streptomyces durmitorensis: M4V62_20035
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Entry
M4V62_20035 CDS
T08503
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sdur
Streptomyces durmitorensis
Pathway
sdur00550
Peptidoglycan biosynthesis
sdur01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M4V62_20035 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdur01002
]
M4V62_20035 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdur01011
]
M4V62_20035 (dacB)
Enzymes [BR:
sdur01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M4V62_20035 (dacB)
Peptidases and inhibitors [BR:
sdur01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
M4V62_20035 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdur01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
M4V62_20035 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Beta-lactamase2
Peptidase_M17_N
Motif
Other DBs
NCBI-ProteinID:
UQT61595
LinkDB
All DBs
Position
complement(4471306..4472817)
Genome browser
AA seq
503 aa
AA seq
DB search
MPAALRAPAKLKTWQLTAGAATVGLAVAAGAVAAAGPWDSSGQRTAERDWAASQEAGGGT
DHGGRTSGRAPAAAPSAPSVLRGLGAPVGSAHGGSAPAPDGKALAGVLDPLLKDKALGPE
RSAVVIDAGTGRRVYGKGGGDALTPASTTKIATAVAALTSAGADHRITTKTVIEPDSKDV
VLVGGGDPTLTARKDGPYSDSAASLRELAQDTARALKDRGTDKVNLSYDTSLYTGEEQHP
IGPNENLTLVSALMADEGRLDDSSSGPAPRSGDPAGDAAKKFAELLEEQGIETGADAGAK
GKKDERDPGPSKASDRAESLAKVESAPLSALVERMLTHSDNDIAEALARQTALASKEPAS
FDGADRAINAQLKKSQLPLKGTKFADGSGLDRADRSSAELLSALLARAADPAHPELRSVV
TGLPVAGFTGTLVDRYPKDSPGTGVVRAKTGTLTGVNTLAGTVVDTDGRLLVFAFMTTGT
TGPKAAQGALDRMASAVATCGCR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atccctgccgctctcagagctcctgcgaagctcaagacctggcagctcacggcgggtgcc
gccaccgtaggactcgctgtcgcggccggtgcggtggccgcggccggcccctgggactcc
tccggtcagcgtacggccgagcgggactgggcggcctctcaggaggccgggggtggcaca
gatcacggaggtcgtacgtccggacgggcgccggcggccgccccgagcgcaccttccgtg
ctcagagggctcggcgcacccgtggggtccgcgcacggcggctccgcgccggctccggac
ggcaaggcgctcgcgggcgtcctcgacccgcttctgaaggacaaggcgctcggtcccgag
cgctcggcggtcgtcatcgacgcgggcaccgggcggcgggtctacggcaagggtggcggg
gacgccctgacgcccgcgtccaccaccaagatcgccaccgcggtggcggcgctgacctcg
gcgggggccgaccaccgcatcaccacgaagacggtcatcgagccggactccaaggacgtc
gtcctggtgggaggcggcgaccccacgctcacggctcgcaaggacggcccgtactcggac
agcgccgcgagcctgcgcgaactggctcaggacaccgcgcgcgccctgaaggaccgcggc
acggacaaggtgaacctgtcgtacgacacctccctctacacgggggaggagcagcacccc
atcggcccgaacgagaacctcacgctggtcagcgccctgatggccgacgagggccgcctc
gacgactcctccagcgggccggccccgcgctcgggggatccggcgggcgacgcggcgaag
aagttcgcggagctcctggaggaacagggcattgagacgggcgcggacgcgggtgccaag
ggcaagaaggacgagagagaccccggcccgtccaaggcgagcgaccgggccgagtccctc
gccaaggtcgagtcggcgccgctgtccgcgctggtcgagcggatgctgacgcacagcgac
aacgacatcgcggaggcgctcgcccggcagacggcgctcgcctcgaaggagccggccagc
ttcgacggcgcggacagagcgatcaacgcccaactgaagaagtcccaactccccctcaag
ggaacgaagttcgcggacggcagcggcctggaccgggccgaccgcagctcggccgaactg
ctctccgcactcctggcccgcgccgccgacccggcccaccccgaactgcgctcggtcgtg
acgggcctgccggtggccggcttcacgggcacactggtcgaccgctaccccaaggactcc
ccgggcacgggcgtagtacgcgccaagaccggcaccctgacgggcgtgaacaccctggcg
ggcacggtcgtggacacggacggccgcctcctggtcttcgccttcatgacaacaggcacg
acgggccccaaggcggcacagggggcactcgaccggatggcttcggcggtggcgacgtgt
gggtgccggtga
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