Shigella dysenteriae Sd197: SDY_0899
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Entry
SDY_0899 CDS
T00306
Symbol
yejF
Name
(GenBank) putative ATP-binding component of a transport system
KO
K13896
microcin C transport system ATP-binding protein
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SDY_0899 (yejF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdy02000
]
SDY_0899 (yejF)
Transporters [BR:
sdy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
SDY_0899 (yejF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_16
AAA_29
DEAD
AAA_13
SbcC_Walker_B
AAA_25
DUF87
CbiA
nSTAND1
AAA_7
AIG1
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
ABB61075
ShiBASE_China:
SDY0899
UniProt:
Q32HY0
LinkDB
All DBs
Position
complement(846422..848011)
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AA seq
529 aa
AA seq
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MTQTLLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLP
SPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS
LHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIA
DEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNY
AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNV
VVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPI
RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRH
RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL
FISHDLHVVRALCHQVIVLRQGEVVEQGPCARVFATPQQEYTRQLLALS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaactctgttagcgattgaagatttgtcggtgggttttcgccatcagcaaacc
gtacgtacagtagtcaatgatgtttcactacagattgaggctggcgaaacgctggcgctg
gtgggtgagtcaggttcaggcaaaagcgttaccgcgctgtcaattttacgcctgctccct
tccccgccggttgaatatctctccggcgatattcgttttcatggcgaatcgctgcttcat
gccagcgatcaaacgttgcgcggtgtacgcggtaataagatcgccatgatttttcaagag
ccgatggtgtcgttaaatccattgcataccctggaaaaacagctttatgaagtgctttca
ctccaccgcgggatgcgtcgggaagcggctcgtggcgaaattcttaactgccttgatcgc
gttggtatccgccaggcggcaaaacggctgacagattatccgcatcagctctccggcggc
gaacgccagcgggtgatgattgcgatggcgctgttaacgcgaccggaattattaattgcc
gatgaaccgaccaccgcactggacgtctctgtccaggcgcagattttacagctgttgcgc
gaactgcaaggcgagttgaatatgggtatgctgtttattactcataacctcagcattgtc
agaaaactggcccaccgcgtggcggtaatgcaaaacggtcgctgtgtcgagcaaaattac
gccgctacgctatttgcctcacccactcatccttacacacaaaagctactcaacagtgaa
ccgtcaggcgatccagtgccgttgccagaacctgcctcaacgttgctggatgttgaacag
cttcaggttgccttccccattcgcaaagggattttgaagcgcattgtggatcataatgtg
gtggtgaaaaacatcagttttacgctacgagcgggtgaaacactgggtttagtgggcgag
tccggttccgggaaaagcacgacgggactggcgctgctgcgactgattaattctcagggc
agcatcatctttgacggtcagccactgcaaaatttaaatcgccgccagctgttacctatt
cgtcatcgcattcaggtggtatttcaggatccaaactcctcgctcaacccacgactcaac
gttttgcagattattgaggaaggcttacgggttcaccagccgacgctttctgccgcacaa
cgcgaacaacaagtgatagccgtgatgcatgaagtgggattagatcctgaaacacgccac
cgttatccggcggagttctctggtggtcagcgacaacgtattgcgattgccagggcatta
attcttaagccctcgctgatcatacttgatgaaccgacatcatcactcgacaaaacggta
caggcgcaaatattgacgctattgaaatcattgcaacaaaagcatcaactggcctatttg
tttatcagccacgatttgcacgttgtccgcgcgttatgtcatcaggttatcgtactgcga
caaggggaagtagtggaacaaggaccgtgcgcgcgcgtgtttgccacaccgcagcaggag
tatacgcgtcagctactggcgttgagctga
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