Shigella dysenteriae Sd197: SDY_1911
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Entry
SDY_1911 CDS
T00306
Name
(GenBank) conserved hypothetical protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00450
Selenocompound metabolism
sdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SDY_1911
Enzymes [BR:
sdy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SDY_1911
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SDY_1911
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABB62017
ShiBASE_China:
SDY1911
UniProt:
Q32F88
LinkDB
All DBs
Position
complement(1740275..1741264)
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AA seq
329 aa
AA seq
DB search
MFINARSAEELVFVRGTTEGINLVANSWGNSNVRVGDNIIISQMEHHANIVPWQMLCARV
GAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKV
LVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIA
TVSLSEGTTWTKAPWRFEAGTPNTGDIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQL
ESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAM
CRASLAMYNTHEEVDRLVTGLQRIHRLLG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
ttgtttatcaacgcccgttcggcggaagagctggtgttcgtccgcggcacaacggaaggg
atcaatctggtcgccaatagctggggcaacagcaatgtgcgggtgggcgataacatcatc
atcagtcagatggagcaccacgctaatattgttccctggcagatgctttgcgcacgcgtt
ggcgcagagctgcgtgtgatcccgctcaatcccgacggtacgttgcaactggagacgctg
cctacgctgtttgatgagaaaactcgcctgctggcaattactcatgtctccaacgtactg
ggaacagaaaatccgctggcggaaatgatcacgcttgcgcaccagcatggcgcaaaagtg
ctggtggatggcgctcaggcggtgatgcatcatccggtggatgttcaggcactggattgc
gatttttacgtgttttccgggcataagctgtatggccccaccgggattggcattctttat
gtcaaagaagccttgttgcaggagatgccgccgtgggaagggggcggttctatgatcgcc
accgtcagcctgagtgaaggcacaacctggaccaaagcaccatggcggtttgaagccggt
acacccaataccggggacatcattggtcttggcgcggcgctggagtatgtttcggcgctg
gggcttaataacatagccgagtatgaacagaatctgatgcattacgcgctatcacagctg
gaatctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgctttt
aatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacggcattgct
gtgcgtaccggacatcactgcgctatgccattaatggcctattacaacgtccctgcgatg
tgtcgggcgtcgctggccatgtataacacccatgaagaagtggatcgtctggtgaccggc
ctgcaacgtattcaccgtctgctgggataa
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integrated database retrieval system
