Shigella dysenteriae Sd197: SDY_3008
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Entry
SDY_3008 CDS
T00306
Symbol
yqcB
Name
(GenBank) conserved hypothetical protein
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdy03016
]
SDY_3008 (yqcB)
Enzymes [BR:
sdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
SDY_3008 (yqcB)
Transfer RNA biogenesis [BR:
sdy03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SDY_3008 (yqcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABB63028
ShiBASE_China:
SDY3008
UniProt:
Q32CC7
LinkDB
All DBs
Position
complement(2778965..2779747)
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AA seq
260 aa
AA seq
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MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV
LLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDK
GPQPAVTHYRGLATVEMPVATGRYPSTRYGLVELEPKTGRKHQLRRHLAHLCHPIIGDSK
HGDLRQNRSGAEHFGLKRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLL
PENERVEFSAPSGQDGEISS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaatactctatcaggatgaatggctggttgcggtaaataaaccctccggctgg
ctggttcaccgtagctggctggatcgcgacgagaaagtagtggtcatgcaaaccgtgcgt
gaccagataggacagcatgtttttactgctcatcgtctggaccgaccaacttctggtgtg
ttgttgatgggattatccagcgaggccggacggctgctggcacaacagtttgaacagcac
caaatccagaaacgttaccatgcgattgtgcgcggctggttgatggaagaagcggtgctg
gattatccactggtggaagaactggacaaaatcgctgataaatttgcccgcgaagataaa
ggcccgcagccagcagtgacgcattatcgcggtctggcgaccgtagaaatgccggtagcg
accggacgttacccgagcacgcgctacggcctggtggaactggagccgaaaaccggacgc
aaacatcagcttcgccgacatcttgcccatttgtgtcatccgattattggcgatagcaaa
catggcgatttacgccagaatcgcagcggtgctgagcattttggtcttaagcggttaatg
ctgcatgccagtcagttgtcattgacgcatccttttactggcgagccgctgactattcac
gcgggcctggacgatacctggatgcaggcgttatcacaatttggctggcgcggtctgctt
cctgaaaatgaaagggttgagttcagtgcgccatcgggtcaggatggagagataagttcc
taa
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