Symmachiella dynata: Mal52_18480
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Entry
Mal52_18480 CDS
T06944
Symbol
rpsA_1
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn00900
Terpenoid backbone biosynthesis
sdyn01100
Metabolic pathways
sdyn01110
Biosynthesis of secondary metabolites
sdyn03010
Ribosome
Module
sdyn_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Mal52_18480 (rpsA_1)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Mal52_18480 (rpsA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sdyn03011
]
Mal52_18480 (rpsA_1)
Enzymes [BR:
sdyn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Mal52_18480 (rpsA_1)
Ribosome [BR:
sdyn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Mal52_18480 (rpsA_1)
Bacteria
Mal52_18480 (rpsA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
RNase_II_C_S1
DUF2110
DUF5105
Motif
Other DBs
NCBI-ProteinID:
QDU43375
UniProt:
A0A517ZLR3
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All DBs
Position
2274620..2276407
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AA seq
595 aa
AA seq
DB search
MNSEQSTSSHNPITNQTPVDEPAEAGVEQTPADSEESSLSTAPPETGRTEPETPAVAAGS
PEETKPAAEATEAASSTPEPPAETAAPETKAEATETPVAASTGDATSAEPAARPRVKLNP
TVDPSMAVAIPSPSLADSRPSKPSTEAEPTGEEAAAVAEAQAVQSTPPPPATPSADPVSL
PPANVDLDADVEAELAAALASEKPTEAPKVVATEGGETSEPVTEEDLEPGTKLKGRVQSI
QKDSILLDVGFRSSAMIQLRQFEGRKQPQLGQELEIVIDRFDAADGLLLASLPRMARSAG
NWDEVSVGQIVDCLVKKSNKGGLEVTVSNLRGFMPASQVDLGFVESLDEYVGQKLTVKII
EVKPEKRNLVVSRRAYMQAEREEVAQDLWKTLEAGQTHSGTVKTVKDYGAFVDIGGIDGL
LHVAEMSWTRVNHPRDILKVGQQLEVQLISVDAEKKKISLSLKQLKKNPWDDCVQRYPVE
SIVQGKVTNITNFGAFIEIEEGVEGLIHISEIDYRRINKVSDVLKEGQEVEAKVVSIDGE
RKRIGLSMKALKAKPEPVKKPKDEDLSPSGGEAYQRKRKGPLKGGTGGSSGPLFG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggaacagtccacttcaagtcacaatcccattaccaatcagacgcccgtggac
gaaccagctgaggctggcgtcgagcaaacgcctgctgacagcgaggagtcatcgctctct
acggcaccgcccgagacgggacggactgaaccggaaactccggctgtggccgccggctcc
ccagaggagacaaagcccgccgccgaagcgaccgaggctgcttccagtacaccggagccg
cccgcagaaactgcagcacccgaaacaaaagccgaggctactgaaacgccggttgcagca
tcaaccggtgatgcgacgagtgcggagccagccgcgcggccgcgagtgaaactgaatccg
accgtcgatccgtcgatggcggtggcgattcccagtccatcgcttgccgattcccgaccg
tcgaagccctccaccgaggcagagccgactggtgaagaggcggctgcagtggctgaagca
caagccgttcagtcgacacctcctccgcccgcaaccccctcagccgatccggtgtcgctc
cctccggcaaacgtcgacttggatgcggatgtcgaagcggaacttgccgctgccttagcc
agcgaaaaaccgactgaggcccccaaggttgtagcgactgaaggtggggaaacgtcggaa
ccggtgactgaagaagatctggagccgggcacaaaactcaaaggccgggtgcagtcgatc
caaaaggacagcattttgctcgacgtcggttttcgttcgtctgccatgattcaactgcgg
cagttcgaagggcgaaaacaaccgcaactgggccaggaactggaaatcgtcatcgatcgt
ttcgacgccgctgacggtttgttgctggcgagtctgccgcggatggcgcgctctgccggc
aattgggatgaagtctcggtcgggcagatcgtggactgtttggtcaaaaaatcaaacaaa
ggcgggctggaagtcaccgtcagcaacctacggggattcatgccggccagccaagtcgac
ttgggttttgtggagagcttggacgaatacgttggccaaaagctgaccgtgaagatcatt
gaagtcaaacctgagaaacgaaatctcgtggtcagccgtcgcgcctacatgcaggccgaa
cgcgaagaagtcgctcaggacctatggaagacactggaggcggggcaaacgcattccggc
acggtcaagaccgtcaaggattatggggcgttcgtcgacatcggcgggattgatggcttg
ttgcacgtggctgagatgagttggacgcgggtcaatcatcctcgcgacattctcaaagtc
ggacaacaactcgaagtgcagttgatttcggtcgatgccgagaaaaagaaaatcagcctg
agcctcaagcagttgaagaaaaatccctgggacgactgcgtgcagcggtatcccgtggag
tcgattgtgcagggcaaagtgaccaacatcaccaatttcggcgcctttatcgaaattgag
gagggcgtcgaagggttgattcacatcagcgaaatcgactatcgccgcatcaacaaggtg
tcggatgtcttgaaggaagggcaggaagtggaggccaaggttgtttccattgatggggaa
cgcaagcggattggcctgtcgatgaaagccctcaaggccaaaccggaaccggtgaaaaaa
ccgaaggacgaggatctctcacccagcggcggcgaagcgtaccaacgcaaacgcaaaggt
ccgctcaagggaggcacgggcggcagcagtggcccgttgttcggttga
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