Sphingomonas echinoides: B18_16515
Help
Entry
B18_16515 CDS
T06681
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sech
Sphingomonas echinoides
Pathway
sech03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B18_16515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_16515
Enzymes [BR:
sech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B18_16515
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B18_16515
RecFOR pathway proteins
B18_16515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
TIP49
AAA_22
AAA_17
nSTAND3
AAA_16
Rad17
AAA_18
RNA_helicase
AAA_14
AAA_28
Resolvase
NTPase_1
TsaE
ABC_tran
NB-ARC
IstB_IS21
AAA_19
T2SSE
AAA_24
RsgA_GTPase
NACHT
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QLD75565
LinkDB
All DBs
Position
3572622..3573680
Genome browser
AA seq
352 aa
AA seq
DB search
MIEPDRLISAVSGRERDEQLDRAIRPLKLADYIGQPSVREQMELFIHAARGRQEALDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEAGDVLFVDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYNVEDLATIVSRSAGILGLEIEPQGAAEIAKRARGTPRIANRLLRRVRDFAEVRGQ
GDITRVIADKALNLLDVDERGFDHLDRRLLLTMIDKFDGGPVGIDNLAAALSEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPKRLGPGVTTDLFTSEDGN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagcctgatcgcctcatatccgccgtttccggtcgcgaacgcgatgagcagctg
gaccgcgccattcgcccgctgaagctggccgactacatcggccagcccagcgtgcgcgag
cagatggagctgttcatccatgccgcgcgcggccgccaggaggcgctcgaccatacgctg
atcttcggtccgccggggctgggcaagacgaccctggcgaatatcatcgcccaggaaatg
ggcgtttccatcaagagtacttccgggccggtgctcgagcgtcccggcgatctcgccgcg
ttgctgaccaacctggaggccggcgacgtcctgttcgtcgacgagatccaccgtctttcg
cccatcgtcgaagaagtgctgtatccggccatggaagatttccagttggacatcatgatc
ggcgaagggcccgcggcccgctccatcaagctggacctgccgccgttcaccctggtcggc
gcgaccactcgtgccggcatgctgaccaatccactgcgcgatcgcttcggtatcgtccag
cgcctggagttctacaacgtcgaggacctggcgaccatcgtcagtcggtcggccggcatt
ctcggcctggagatcgagccgcagggcgcggcggaaatcgccaagcgcgcccgcggtacg
ccgcgaatcgccaatcgcctgctgcgccgggtacgcgacttcgccgaggtccgggggcag
ggcgacattacccgggtgatcgccgacaaggcattgaacctgctcgatgtcgacgagcgt
ggcttcgaccacctcgaccgtcgtctgttgctgaccatgatcgacaagttcgatggcggg
cctgtaggaatcgacaacttggctgcggcgttgagcgaggagcggcacacgatcgaagat
gtactggagccctatctgatccagcagggctacatcatgcggacaccgcgggggcgcgtg
gtaacacgccatgcgtacctgcactttggcctgaatattccaaaaaggttggggccgggg
gtgacgacggatctgttcacgtctgaagatggtaattaa
DBGET
integrated database retrieval system
