Sphingomonas echinoides: B18_20925
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Entry
B18_20925 CDS
T06681
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sech
Sphingomonas echinoides
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sech01011
]
B18_20925
Enzymes [BR:
sech01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B18_20925
Peptidoglycan biosynthesis and degradation proteins [BR:
sech01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B18_20925
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
MLTD_N
OapA
Motif
Other DBs
NCBI-ProteinID:
QLD76440
LinkDB
All DBs
Position
complement(4508220..4509824)
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AA seq
534 aa
AA seq
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MPPQTRKTPDLDALARAVRVSILLIAGALAGCQGSGQIKGEAQAKAARPGARAVDVQFNP
SWLHTQPGQNAAYNDIWDRMRDGFQLQDAISTNPRIERQRLWFLSNQSFLEQSSARGSLY
MHYVVERLEERNMPLELALLPVIESAYNPFALSRSNAAGLWQFIPATGQHFNLRQTNFYD
GRRDITASTNAALTYLERLHDMFNGDWMLALAAYNAGEGTVSRAIERNEKLGLPTDYWNL
PLPQETQDYVPKLLALSQIVMAPDSYGISLNPINNEPYFQAVRVKRGIDLSSVAALANLD
EDELYQLNPAYKRRVTMDGPQQLLVPMEKAAFLTASLDTLKPKEVTAWQQYRVRSGDSLH
SIANRYRITVAELKSANRLSSNHLRKGQQLSIPGQIAGGAVKPVYQQLARQASTPARTRS
YKVKNGDSLWQIARNNGVDVNDLKRWNGLDKHALKVGQTLKLQGGTQALAARKGNAAGKR
DSATYYKVKQGDSMYLIAKRFNVEMKHLQRWNPRSKQALKPGQTLTLYLDTASR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacagacacgtaaaacccccgatctagacgccctggctcgcgccgttcgggtg
tccatcctgctcatcgccggtgcgctcgccggctgccagggcagcggccagatcaagggg
gaggcccaggccaaagcagcacgtcccggcgcccgagccgtcgacgtccagttcaacccc
tcctggctgcatacccagcccggccagaacgccgcctacaacgacatctgggaccgcatg
cgcgacggtttccagctccaggatgcgatcagcaccaacccgcgcatcgaacgtcagcgc
ctctggttcctcagcaaccagtcattcctcgaacaatcgagcgcgcgcggcagcctctac
atgcactacgtggtcgagcgcctggaagaacgcaacatgccgctcgaactggcgctgctg
ccggtcatcgaaagcgcctacaaccccttcgccctgtcgcgcagcaacgccgccggcctc
tggcagttcattcccgccaccggccagcatttcaacctgcgtcagaccaatttctacgac
ggtcgccgcgacatcaccgcctcgaccaatgccgccctgacctatctcgagcgcctgcac
gacatgttcaacggcgactggatgctcgccctggcggcctacaacgccggcgaaggcact
gtcagccgcgccatcgaacgcaacgagaaactgggcctgccgaccgactactggaaccta
ccgctgccgcaggaaacccaggactacgtacccaagctgctcgccctctcacagatcgtc
atggcgccggattcctacggcatcagcctgaacccgatcaacaacgagccctacttccag
gccgtccgggtcaagcgcgggatcgacctgtccagcgtcgccgcgctggcgaacctggac
gaggacgagctgtaccagctgaacccggcctacaagcgccgcgtgaccatggacggcccc
cagcaactgttggtgccgatggagaaagcggcgttcctgaccgcctcgctggacaccctc
aagccgaaggaagtcaccgcctggcagcaataccgggtgcgtagcggcgacagcctgcac
agcatcgccaaccgctatcggatcaccgtagcggagctcaagagcgccaaccgcctgtcc
agcaaccacctgcgcaagggccagcaactgagcatccccgggcagatcgccggcggcgcc
gtcaagccggtctaccagcaactcgcccgacaggcttccaccccggccaggacccgctcc
tataaggtcaagaacggcgacagcctatggcagatcgcccgcaacaacggcgtcgacgtc
aacgacctgaagcgctggaacggcctggacaagcacgccctgaaggtcggccagaccctc
aagctgcaaggcggcacccaggccctggcggcccgcaagggaaacgccgccggcaagcgc
gacagcgccacctactacaaggtcaagcaaggcgactcgatgtacctgatcgccaagcgc
ttcaatgtcgaaatgaagcacctgcagcgctggaacccgcgcagcaagcaggcgctcaag
cccggccagaccctgaccctgtacctggacaccgcgagccgctga
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