Sedimentibacter sp. zth1: JYG23_02455
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Entry
JYG23_02455 CDS
T07110
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_02455 (addA)
Enzymes [BR:
sedz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYG23_02455 (addA)
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JYG23_02455 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PDDEXK_1
ResIII
DEAD
SLFN-g3_helicase
T2SSE
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QSX06343
UniProt:
A0A974XAQ3
LinkDB
All DBs
Position
510714..514340
Genome browser
AA seq
1208 aa
AA seq
DB search
MKWTENQQKVIDSRNKNILVSAAAGSGKTAVLVERIIKLVKDNKEEIDSFLIVTFTNAAA
AGMKQKIQKALYKDLEDDSISDDNLKRHLRNQLNKLNKANISTIHSFCIDLLRKNFHVIG
IDPNFRIGDPNECQILLNEAVDDVLEQAYTDKSSDFVQLVECFTSNRSDKELVELIKDMY
YFILSFPNPLEWFEKSVNMLEITEIELDESIWLSVIRENVGTLLDGAEEAIKLAIDLSKE
EAGPIAYFDTFSRDLSNVSELRDSLINSNFNNFINNLYSLSHPRLASIRGKKKEEVDAVL
LDDAKSMRNEYKKIVDGIKKLIPNKTMKEFTEAINYMYPAMKALFELVKSLMNEFKIKKA
DKAILDFGDVEHFALDALSYEDVRESCRNKYKFIFVDEYQDSNQIQETLIGLIKRDNNVF
MVGDSKQSIYKFRLADVDLFNSKLRTYKTECDEGDLNQRIDLNHNFRSRFEILAATNYIF
EKIMSKKLGELDYNKEVFLNVGTEFKKSKDDRVELDIIETQTVEADEDIDEELQAMKKAE
IEAFFAVNKIKDLLGQKTYFAKENEFRTIEFKDIVILLRSVANWSTVFEEIFFNQGIPFY
SDTGTGYFETIEIEIMINMLRLIDNIRQDIPLLSIMRSPIGKFTTEELIKIRIKSPKISF
IDAMYIYKNNEKNDLQQKIISFIDMIENYKKNSRYEKLNDLIWKILMETDYYYFVGALPN
GKVRQANLRLLTDKAFEYENTSMTGLYNFLKYIEKLKLYNSDESTAKILGENDNVVRLMT
IHKSKGLEFQVVILCGLNKKFNMMDVSKSILKHKTYGIAPKYVNPELRIYKETLPRIALK
DVTKLETLSEEMRVLYVALTRAVDKLILCGTVKSAEGRVKKWRKGTTHYNLYTSQSYLDW
ICSSIYKHKDGYELRKLCNDDNSIVKNDIHNASFLINILTLKDINYSANQAENKREERIE
EIKHFTEEVHSIETDEINRRLSFEYSYKKSINIPTKLSVTDIKNLDKKDVNVENIKYNIP
KLVDIPLFKENNINFTQAEIGTITHYVMQHLDLNQQLDIQNINEQIANMIMHKLLTESEA
EVVNIEQIVMFFKSDIGKRMLLSSNIKRETPFVIKKHANEVVKNINENEFVLIQGIIDCY
FYEKDEIIVIDYKTDKVNDENIDIIKNQYKKQILSYKEAIQKLTNKKVKQCYLYLFDIGK
QILIEDED
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggactgaaaatcaacagaaggtaatagactcaaggaataagaatattttagtt
tcagcagcagctggctcaggaaaaactgctgtgctcgtagagagaattataaaacttgtg
aaagataataaagaagaaatagatagttttttgattgtgacatttaccaacgccgcagct
gctggaatgaaacaaaagattcaaaaagcattatataaagatttagaagatgatagtata
agtgatgataatttaaaaagacatcttagaaaccagttaaataagctaaataaagcaaat
atttcaactatacactcgttttgtatagatttattaagaaaaaattttcatgttattggt
attgacccgaattttagaattggtgatccaaatgaatgccaaatacttttgaatgaagca
gttgatgatgttttagagcaggcttatactgataaatccagtgattttgttcaattggtt
gaatgcttcacaagcaatagatcagacaaagagttagtagagttaattaaagatatgtat
tattttatattgagctttccaaatccacttgagtggtttgaaaaatctgttaatatgctt
gaaattactgaaatagaattggatgaatcaatttggttaagtgtaattagagaaaatgta
ggcacacttttagatggagcagaagaagctataaaattggctatagatttatcaaaggaa
gaagctggaccaatagcatattttgatacgttttctagggatttaagcaatgttagtgag
cttagagattcattgataaattctaattttaataattttataaataatctatattcactt
tcacacccaagacttgcttctataaggggtaagaaaaaggaagaagtggatgctgtttta
ttagatgatgcaaaatctatgcgtaatgaatataaaaaaatagttgatggtataaaaaag
cttattccaaataaaacaatgaaggagtttacagaggctataaattatatgtatccggcg
atgaaagctctatttgaattggttaaaagtttaatgaatgaatttaagataaaaaaagca
gataaagctattcttgattttggagatgttgaacattttgctcttgatgctttgtcctat
gaagacgtaagagaaagctgtaggaataaatataaatttatttttgttgatgaatatcaa
gatagtaatcaaattcaggaaacacttattggtttgataaaacgtgataataatgtgttt
atggttggagattcaaagcaaagtatatataaatttagacttgctgatgttgatttgttt
aactctaagctaagaacatataaaactgagtgtgatgaaggtgatttaaatcaaagaata
gatttaaaccataatttcagaagtagattcgagatacttgcagcaactaattatatattt
gaaaaaattatgtctaaaaaactaggtgaacttgattacaataaagaagtatttttaaat
gttggtacagaattcaaaaaatcaaaggatgacagagtagaactagatattattgaaacg
cagacagtagaagcagatgaagatattgatgaagaactacaagctatgaaaaaagctgaa
attgaagctttttttgctgtaaataaaattaaagatttactaggacagaaaacttatttt
gcaaaggaaaatgagtttagaactatagaattcaaggacatagttatattacttaggtca
gttgcaaactggtctacagtttttgaagaaatattttttaatcagggaattcctttttat
tcagacacaggaacaggttattttgaaacaattgaaatagagattatgattaatatgctt
agacttattgataatattaggcaagatattccgttattaagtatcatgaggtcacctata
ggtaaatttactacagaagagctaataaaaattaggattaaatcacctaagatttcattt
atagatgcaatgtacatttataaaaataatgaaaaaaatgatcttcaacaaaaaataata
tcatttatagatatgattgagaattacaaaaaaaatagtagatatgaaaaactaaatgat
ttgatatggaaaatactgatggagactgattattactattttgtaggtgcattgccaaac
ggtaaggtaagacaagcaaatttaagactattaactgacaaggcatttgagtatgaaaat
acatcaatgacaggactatataattttctaaaatatattgagaagttaaagttgtataat
agtgatgaaagtacagctaagatactcggtgaaaatgataatgtagttagacttatgaca
atacataaaagtaaaggtttagaatttcaagttgttattttatgtggtttgaataaaaaa
tttaatatgatggatgtttcaaaaagcatactaaagcataaaacatatgggatagcacct
aaatatgttaatcctgaactgagaatttacaaagagacattacctagaattgctttgaaa
gatgtaactaagcttgaaacgttatctgaagaaatgagagttttatacgttgcgcttaca
agagcagttgataagcttattttgtgtgggacagtaaagagtgctgagggaagagtaaaa
aaatggagaaaaggtacaacacattataatttatatacttctcaatcgtacttggattgg
atttgcagttctatttataaacataaggatggttatgagctaagaaaattatgtaatgat
gacaacagtatagttaaaaatgatatacacaatgcatcatttttgattaatattttaaca
ctaaaggatatcaattattcagcgaatcaagctgaaaataaaagagaagaaagaattgaa
gaaattaagcattttacagaagaagttcatagcatagaaacggatgaaataaacagaaga
ttaagctttgaatattcctacaaaaagtcaataaacataccaactaagttatctgtaacc
gatattaaaaatcttgataaaaaagatgtaaatgttgaaaatattaagtataatatacct
aaattagttgatataccattgtttaaagagaataatattaactttacacaagcagaaata
ggaactataactcactatgttatgcaacatttagacctaaatcaacagcttgatattcaa
aatattaatgaacaaattgcaaatatgattatgcataagctattaacagaaagtgaagct
gaggtagtaaatattgaacaaatagtaatgttctttaaaagtgatataggaaaaagaatg
cttttatcttcaaatataaaaagagaaacacctttcgttataaaaaagcatgccaatgaa
gtagttaaaaacattaatgaaaatgagtttgtactaatacagggtatcatagactgttat
ttttatgagaaggatgaaataattgttatagattataaaacagataaggttaatgacgaa
aacatagacataataaagaaccaatacaaaaagcaaattctatcatataaggaagctata
caaaaattgactaataaaaaggttaaacagtgttacctatatttatttgatataggaaag
cagatattgatagaggatgaagactaa
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