Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_004315
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Entry
SEEB0189_004315 CDS
T02739
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
seeb
Salmonella enterica subsp. enterica serovar Bareilly
Pathway
seeb00330
Arginine and proline metabolism
seeb00480
Glutathione metabolism
seeb01100
Metabolic pathways
seeb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
seeb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SEEB0189_004315
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SEEB0189_004315
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SEEB0189_004315
Enzymes [BR:
seeb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SEEB0189_004315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGQ58006
UniProt:
A0A4D6P216
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Position
818029..820164
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AA seq
711 aa
AA seq
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MKSMNIAASGELIPRLSTHRNVVALDSTDFTDVAAVVITPADSRSGILALLKRTGFHLPV
FMLADEPVSAPVGVTAVIGGNAQEWLELENAACRYEAELLPPFYGTLTQYVDMGNSTFAC
PGHQHGEFFRKHPAGRHFYDFFGENLFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFN
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDAHCFDETYLRDQIRDVMPESADALRPFRLAIIQLGTYDGTIYNARQVVDKIG
HLCDYILFDSAWVGYEQFINMMADTSPLRLELNENDPGILVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVALG
IDARKAILARCKLLQPFIPLVVDGKPWQAYPTETIASNRRFFSFEPGAKWHGFEGYADDQ
YFVDPCKLLLTTPGIDADSGRYTEFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES
EEKLARLVAMLAQFERHIEDDTPLADVLPTVFQKYPVRYRDYTLRELCQEMHNLYVSFDV
KDLQKAMFRKESLPHVAMNPQDANSAFIRGDVELVRISEAGGRIAAEGALPYPPGVLCVV
PGEIWGGAAQRYFLALEEGINLLPGFSPELQGVYSETDADGIQRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatgaatattgccgccagcggtgaactcatcccccgtctctccacccaccga
aacgtagtggcgctggacagtaccgactttaccgatgtggccgcagtcgtcattacccct
gccgacagccgtagcggtattctggcgttgcttaaacgcaccggttttcacctgccggta
tttatgcttgcggatgaacccgtcagcgcgcctgtcggcgttacggcggtaatcggcggg
aacgcgcaggaatggctggagctggaaaacgctgcctgtcgctacgaagcggaacttctg
ccgcccttttatggcaccctgacccagtatgtcgacatggggaatagtacctttgcttgc
ccggggcaccagcatggcgagttttttagaaaacatcccgcaggccgccatttttatgac
ttttttggtgaaaacctgtttcgtgcggatatgtgtaacgccgatgtgaaacttggcgat
ctgctaatacatgaaggttctgccaaacacgcgcagaaatttgcggcaaaagtgtttaat
gcggataaaacctattttgtgctgaatggaacttcggcggcgaataaagtggtcaccaat
gccctgctgacgcgcggcgatctggtgctgtttgatcgtaataatcacaaatccaaccac
cacggcgccctgattcaggccggggcgacgccggtctatcttgaagcggcgcgcaacccg
tttggttttatcggtggtattgatgcgcactgttttgatgaaacgtacctgcgcgaccag
attcgtgacgtgatgccggaaagcgccgatgcgctgcgtccgttccgcctggcgatcatt
cagctgggtacctatgacggcactatttacaacgcccgtcaggtggtggataaaatcggg
catctctgcgattacattctgtttgactccgcgtgggtaggctatgagcagtttatcaat
atgatggcggatacctcgccgttgcggctggagcttaatgaaaacgacccagggatcttg
gtgacccaatcggtacataagcaacaggcggggttctcacaaacctcgcagatccacaaa
aaagataaccatattcgcggccaggcgcgtttttgtccgcacaaacgcctgaacaacgcc
ttcatgttgcatgcttcaaccagtccgttctacccgctgtttgcggcgctggatgtcaat
gccaaaatccacgaaggggagagcggtcgccgcctgtgggcggagtgcgttgcgctgggc
attgacgcgcgtaaagccattctcgcccgttgcaaactgcttcagccctttatcccactg
gtggttgacggcaagccgtggcaggcatatccgacggagaccattgccagcaatcgtcgt
ttcttcagttttgaacctggggcgaaatggcatggctttgagggttatgcggatgaccag
tattttgtcgacccctgtaaactgttactgaccacgccaggtattgatgccgatagtggg
cggtacaccgaattcggcatcccggcgaccattctcgcccactatctgcgtgagaacggt
attgtgcctgagaagtgcgatctcaactcaattctgttcttgctgacacccgccgagagc
gaagagaaactggcgcggctggtcgcgatgctggcgcaatttgaacggcacattgaagac
gatacgccgcttgcggatgtattgccgacggtttttcagaaatacccggtgcgctaccgc
gattacaccctgcgtgagctatgtcaggagatgcacaacctgtacgttagctttgacgtt
aaggatctgcaaaaagcgatgttccgcaaagaaagcctgccgcatgtggcgatgaaccca
caggacgccaacagcgcctttattcgcggcgatgtagagctggtgcgtatcagcgaggcg
ggcgggcgtattgctgccgagggggcattgccatacccgccgggcgtactgtgcgtggtg
ccgggggagatttggggcggtgcggcgcagcgttattttttggcgctggaagagggcatc
aatctgttgcccggtttttcgccggaattgcagggagtgtatagcgagaccgatgccgat
ggaattcaacgcttgtatggatatgttttaaagtaa
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