Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_3241
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Entry
UMN798_3241 CDS
T01782
Symbol
gcvA
Name
(GenBank) regulatory protein for glycine cleavage pathway
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sef03000
]
UMN798_3241 (gcvA)
Transcription factors [BR:
sef03000
]
Prokaryotic type
Helix-turn-helix
LysR family
UMN798_3241 (gcvA)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AFD59876
LinkDB
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Position
complement(3154836..3155753)
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL
KTPEDLAKHTLLHDASRRDWQAYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGIALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAATEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgattacctcctttaaatgcgttacgcgtttttgatgctgccgcgcgtcat
ttgagctttacgcgagcagcggaagaactttttgtgacgcaggccgcagtaagccaccaa
attaagtcacttgaggattttttggggctaaaactgttccgccgccgcaatcgttcgctg
ctgctgacggaagaaggccaaagctattttctcgacattaaagagatattttcccagctc
acggaagcaacgcgtaagctccaggcgcgcagtgccaaaggggcgctgacggtgagttta
ccgcccagttttgccatccagtggctggtgcccaggctctccagctttaactcagcttat
ccgggaattgacgttcggatacaagccgttgaccgtcaggaagataaactggcagacgat
gtcgatgtcgcgattttttatggccggggaaactggccgggcttgcgcgtcgaaaaatta
tacgcagaatatttactgcccgtctgttctcctttattactcacaggcgaaaaaccgtta
aaaacgccggaagatctggcgaaacacacgctattgcacgacgcctcccggcgtgactgg
caggcctatactcgtcagttagggctcaaccatattaacgttcagcaagggccgatattt
agccacagcgcgatggtgctacaggccgctattcacggacaggggatcgcgctggcgaat
aatgttatggcgcagtcggaaattgaagccgggcgactggtgtgtccatttaacgatgtt
ctggtgagtaagaatgctttttatctggtttgtcatgacagccaggcagaactgggtaaa
atagccgccttccgtcagtggattttggcgaaggcggcgacggagcaagaaaaattccgt
tttcgttacgaacaataa
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