Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG1400
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Entry
SG1400 CDS
T00770
Symbol
topA
Name
(GenBank) DNA topoisomerase I, omega protein I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
seg
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Brite
KEGG Orthology (KO) [BR:
seg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seg03032
]
SG1400 (topA)
03400 DNA repair and recombination proteins [BR:
seg03400
]
SG1400 (topA)
Enzymes [BR:
seg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SG1400 (topA)
DNA replication proteins [BR:
seg03032
]
Prokaryotic type
DNA Topoisomerases
SG1400 (topA)
DNA repair and recombination proteins [BR:
seg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SG1400 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAR37273
UniProt:
B5R6N6
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Position
1468224..1470821
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AA seq
865 aa
AA seq
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MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDARYSRVVFNEITKNAIRQAFEQPGELNINRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPSGEALPLQVTH
QNDKPFLPVNREQTLAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPDNPNQYASKEN
SQEAHEAIRPSDVAVMAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGEF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDALTLLELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEEIYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKDGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggtgaaatccagcgtgggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgtatgggggttgacccgtggcacaactgggat
gcgcactatgaagtgctgcccggtaaagagaaggtcgtctctgaactgaaacagttggcg
gaaaaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggcggcgatgacgcgcgctacagtcgcgtagtctttaac
gaaataaccaaaaatgccattcgccaggcgtttgaacagccgggcgagctgaacattaac
agggtcaacgcccagcaagcgcgccgctttatggatcgcgtggtaggctatatggtctcg
ccgctgctgtggaaaaagatcgcccgtggtttgtcggcaggtcgcgttcagtctgtcgcg
gtccgtctggtcgttgaacgcgagcgcgagattaaagcgtttgttccggaagagttctgg
gaaattgacgctaatacgacgacgccgtctggcgaggcgctaccgctacaggtcacgcat
cagaacgacaagccattcctgccggtaaatcgcgagcagacgcttgctgcggtgagcctg
ctggaaaaagccagctatagcgtgctggagcgagaagacaagccgaccagcagcaagcca
ggcgcgccgtttatcacctccacgctacaacaggcggccagcacccggctgggctttggc
gtgaagaaaaccatgatgatggcgcagcgtctgtatgaggcgggctacatcacctatatg
cgtacagactccaccaacctgagtcaggatgcggtcaacatggtgcgcggctatattggc
gataatttcggcaagaaatacctgccggataacccgaaccagtacgccagcaaagaaaac
tctcaggaagcgcacgaagcgatccgtccttccgacgttgcggtcatggcggagtcgctg
aaagacatggaggctgacgcgcagaagttgtatcagctaatttggcgtcagtttgtcgcc
tgtcagatgacgccagcacaatatgactccactacgcttaccgttggtgcaggcgagttc
cgtctgaaagcgcgtgggcgtattttgcgctttgacggctggacaaaagtgatgccggcg
ctgcgtaaaggcgatgaagatcgcacattgcctgccgtgaataagggcgatgcgctgacg
ctacttgaattgacgcctgctcagcactttactaaaccgccagcccgtttcagcgaggct
tctctggttaaagagcttgagaagcgcggtattggtcgtccgtctacctatgcgtcgatt
atctcgaccattcaggatcgcggctatgttcgcgttgaaaaccgtcgcttctatgcggaa
aaaatgggtgaaatcgtcaccgatcggctggaagaaaacttccgcgaattgatgaactac
gattttactgcgcagatggaagatagtctggatcaggttgcgaatcaccaggccgagtgg
aaagcggtactggataacttcttcagcgattttactcagcagctcgataaagccgagaaa
gatccggaagaaggggggatgcgtcctaaccagatggtgctgaccagcatcgactgtcca
acctgtggccgtaaaatgggaattcgtactgccagtacgggcgttttccttggatgttca
ggttatgcgctttcgccgaaagagcgttgtaaaacgaccattaacctggtgccggaaaat
gaagttctgaacgtgctggaaggcgacgacgccgaaaccaacgccctgcgcgccaagcgt
cgctgccagaagtgcggtacggcgatggacagctatctgatcgatccgaagcgtaaattg
catgtgtgtggtaataacccgacctgtgacggctacgagattgaagaaggcgagttccgc
atcaaagggtatgacggcccgatcgttgagtgtgagaaatgtggttccgaaatgcacctt
aaaatggggcgttttggtaagtacatggcctgtactaacgacgaatgtaaaaatacccgt
aagatcttgcgtaacggcgaagttgcgccgccgaaggaagatcctgttccattaccggaa
ctgccgtgtgaaaaatcggacgcgtactttgtgctgcgcgatggcgccgcagggatattc
ctggcggccaatacgttcccgaaatcacgcgaaacgcgcgcgccattagtcgaggagatt
taccggttccgcgatcgcctgccggaaaaactgcggtatctggcggatgcgccgcagcag
gatccggaaggtaataaaaccgttgttcgctttagccgcaaaacaaaacagcagtacgtt
gcggcggaaaaagacgggaaggcgacgggatggtcagcgttcttcgtcgacggcaagtgg
gttgaaggtaagaaataa
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