Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601: SSPA0861
Help
Entry
SSPA0861 CDS
T00756
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
sek
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Pathway
sek03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SSPA0861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sek03400
]
SSPA0861
DNA repair and recombination proteins [BR:
sek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSPA0861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH
GIY-YIG
UVR
HHH_5
HHH_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CAR59004
UniProt:
B5BGC1
LinkDB
All DBs
Position
993981..995813
Genome browser
AA seq
610 aa
AA seq
DB search
MSEIFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
AQIQHIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA
GLVSEEEYTQQVEYVRLFLSGKDDQVLTQLIARMEKASQDLAFEEAARIRDQIQAVRRVT
EKQFVSNAGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRRIHVQTKPRGDRARYLKLART
NAATALITKLSQQSTITQRLTALAAVLKLPAIKRMECFDISHTMGEQTVASCVVFDANGP
LRAEYRRYNIAGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFA
ELDVPWDKHCPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDH
AIGGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGL
AEKIFWSLKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaaatatttgacgcaaaggcgttcctgaaaaccgttaccagccaacccggtgtc
tatcgtatgtatgacgccggcggtacggttatctatgttggtaaagcaaaagacctgaaa
aagcgtctttccagctactttcgcagcaacctggcttcgcgtaaaaccgaagcgctagtt
gcgcaaattcaacacattgatgtcacggtaacgcataccgaaacggaagcgctgctgctt
gagcataattacatcaagttgtatcaaccgcgttacaacgtgttgttgcgtgatgataaa
tcctatccttttatttttctgagcggcgatacccatccgcgtctggcgatgcaccgtggc
gccaaacatgcgaaaggcgagtacttcggcccatttcctaatggctatgccgtgcgggaa
acgctggcgctgttacagaaaattttccctatccgccagtgcgaaaacagcgtgtatcgc
aaccgctcgcgtccttgcctgcaataccagattggccgctgcttaggcccctgcgttgca
ggactggtcagcgaggaggagtacacgcaacaggtggagtatgtccggttgtttttgtcc
ggcaaggacgaccaggtcttaacacagctgattgcccggatggaaaaggccagccaggat
ctggcatttgaagaggcggcgcgtattcgcgatcagatccaggcggtacgccgggtcacg
gaaaaacagtttgtctccaatgcgggcgacgatctcgacgtgatcggcgtggcttttgat
gcgggtatggcctgtgtgcatgtgctgtttattcgccagggtaaggtgctgggcagccgc
agctattttccaaaagtgcctggcggtacggaactgggcgaagtggtggaaacctttgtc
gggcagttttacctgcagggtagccagatgcgcacgctaccgggcgagatactgctcgat
tttaatctgagtgataaaacgctgctggccgattcgttgtcggaactcgccggacggcgt
attcatgttcagacaaaaccgcgcggcgatcgcgcccgttatctcaagctggcgcggacc
aacgcggcaacggccttaatcactaaactctcgcagcagtccaccatcacgcagcgtttg
actgcgctggcggcggtattaaaacttcctgcgatcaagcggatggaatgttttgacatc
agccatactatgggggagcaaacggtcgcatcctgtgtggtatttgacgctaacgggccg
ttacgcgccgagtatcgtcgttataatatcgcgggcatcacgccgggtgatgactacgcg
gcgatgaatcaggtgctacgtcggcgttatggcaaggccatagaagaaagtaagattccg
gatgttattctgatcgacggcggaaaagggcagctcgcccaggcgaaagccgtttttgct
gagctggatgtcccctgggataagcattgccctttgctgcttggcgtcgccaaaggcgcg
gacagaaaggccggtctggaaacactcttttttgaaccggaaggcgaggggtttagcctg
ccgccggactcgccggcgctacatgttattcagcatattcgcgatgagtcgcacgatcac
gcgatcggcgggcaccgtaaaaaacgcgcgaaggttaaaaataccagtacgctggaaact
attgaaggcgttgggcctaaacgtcgccagatgctgctgaaatatatgggcggtttgcaa
ggattacgtaacgccagcgtagaagaaattgcaaaagtgccgggtatttcgcaaggtctg
gcagaaaagatcttctggtcgttgaaacattga
DBGET
integrated database retrieval system
