Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_4167
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Entry
SPUL_4167 CDS
T01740
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPUL_4167 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sel03021
]
SPUL_4167 (rpoA)
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_4167 (rpoA)
Enzymes [BR:
sel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPUL_4167 (rpoA)
Transcription machinery [BR:
sel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPUL_4167 (rpoA)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPUL_4167 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RepSA
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
AET56394
LinkDB
All DBs
Position
4212643..4213632
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQDKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIVDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggcttcggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgttcaggaagacatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcaggataaagatgaagttattctt
accttgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggggat
gtcgaaatcgtcaagccgcagcacgtgatctgccacctgaccgatgaaaacgcgtctatt
agtatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctacccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcctgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccatcctggctgaacaactggaagctttcgttgatttacgtgatgtacgtcaaccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagcttcttaagacgcctaacctgggtaaaaaatctctt
accgagattaaagacgtgctggcttcccgtggactgtctctgggtatgcgcctagaaaac
tggccaccggcaagcatcgttgacgagtaa
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