Streptomyces endophytica: OJ254_24625
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Entry
OJ254_24625 CDS
T09208
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
seng
Streptomyces endophytica
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
UZJ32893
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Position
complement(5522519..5523541)
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AA seq
340 aa
AA seq
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MTGGRANEAVELDVAGRTVRVSHPDKTYYPERGFTKLDVARYYLAVADGVLRGLRDRPTT
MQRFPDGVEGEFFYQKRAPKGLPDWLPTARIAFPSGRFADEMCPTEPAAVVWAANLGCLT
FHPWPVRRGDTEHPDELRIDLDPQPGTDFTDAVRVAHELRALLDEHGLRGWPKTSGGRGV
HIYVPIRPQWTFTEVRRAAITVARAMERRLPDLVTSAWWKEERGAKIFVDYNQMARDRTI
ASAYSLRARPRATVSAPLRWEELSDAVPEDFDLRTMPRRFAELGDVHADMADHAFGLESV
FDLADRQAADEGLGDLPYPPDHPKMPGEPPRVQPSRARKR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaggtcgggccaacgaggccgtcgagctggacgtcgcggggcgcacggtgcgg
gtgtcccacccggacaagacgtactacccggagcgcggcttcacgaagctggacgtcgcc
cgctactacctcgcggtcgcggacggggtgctgcgcgggctgcgcgaccggcccaccacg
atgcagcgcttccccgacggcgtggagggcgagttcttctaccagaagcgggcgcccaag
ggcctgcccgactggctgccgaccgcccggatcgccttccccagtgggcggttcgccgac
gagatgtgccccaccgagcccgccgccgtggtctgggcggccaatctcgggtgcctgacc
ttccacccgtggccggtccgccgcggcgacaccgagcaccccgacgaactgcggatcgac
ctcgacccgcagcccggcaccgacttcacggacgccgtacgggtcgcccacgagctgcgc
gcactgctcgacgagcacgggctgcgcggctggcccaagacctccggcggccggggcgtg
cacatctacgtgccgatccggccgcagtggacgttcaccgaggtccgacgggccgcgatc
accgtggcccgggccatggaacggcggctgccggacctggtcacctcggcctggtggaag
gaggaacgcggcgcgaagatcttcgtcgactacaaccagatggcccgggaccgcacgatc
gcctcggcctattcgctgcgtgcccggccgcgcgccacggtctccgccccgctgcgctgg
gaggagctgtccgacgccgtcccggaggacttcgacctgcgcacgatgccgcggcggttc
gcggaactcggtgatgtgcacgccgacatggcggaccacgccttcgggctggaatccgtc
ttcgacctcgcggaccggcaggcggccgacgaggggctgggcgatctgccctatccgccc
gaccacccgaagatgccgggggagccgccccgggtgcagccgagccgggcccgcaagcgc
tga
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