Sodalis endosymbiont of Henestaris halophilus: HBA_0318
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Entry
HBA_0318 CDS
T05311
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03030
DNA replication
seny03430
Mismatch repair
seny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBA_0318 (holD)
03430 Mismatch repair
HBA_0318 (holD)
03440 Homologous recombination
HBA_0318 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seny03032
]
HBA_0318 (holD)
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0318 (holD)
Enzymes [BR:
seny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBA_0318 (holD)
DNA replication proteins [BR:
seny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBA_0318 (holD)
DNA repair and recombination proteins [BR:
seny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBA_0318 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Amido_AtzD_TrzD
Motif
Other DBs
NCBI-ProteinID:
SNC58584
UniProt:
A0A2C8CWD8
LinkDB
All DBs
Position
I:complement(518445..518837)
Genome browser
AA seq
130 aa
AA seq
DB search
METKYDYFLKQLGITQWTLRRPEVLHGAFAVKLPKHIRLLLVGNPAPAVDHRLVADVAHS
MKLKTTQLYGMTPEQVMSLSDSVRCHCWWFGLSALRDFHKISLHTPPLAALLGDANAKRE
LWLRISNIVF
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaatacgattacttcttaaaacaactcggcattactcaatggacgctccgt
cggccagaggtacttcatggagcattcgcagtaaaattgccaaagcatattcgtttatta
ctagtcggcaatccggcaccggcggtagatcatcgtctggtggcagatgtagcgcacagc
atgaaattaaagacgacgcagctttacggaatgacacccgagcaggtaatgtcattgtca
gacagcgttcgttgccattgctggtggttcggtttgtccgctctgcgtgattttcataaa
atatctttacatactccaccactggcagcgcttttaggggatgctaatgccaagcgagag
ctatggctccgtatcagtaatattgttttctaa
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