Prodigiosinella confusarubida ATCC 39006: Ser39006_002270
Help
Entry
Ser39006_002270 CDS
T05290
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sera03032
]
Ser39006_002270
03036 Chromosome and associated proteins [BR:
sera03036
]
Ser39006_002270
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_002270
DNA replication proteins [BR:
sera03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ser39006_002270
Chromosome and associated proteins [BR:
sera03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ser39006_002270
DNA repair and recombination proteins [BR:
sera03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ser39006_002270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AUH03063
UniProt:
A0A2I5T2G1
LinkDB
All DBs
Position
complement(495523..495795)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIADKADLSKAHAKAALEATLAAITESLKEGDAVQLVGFGTFKVNHRNERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactcaactgattgatgtaattgctgataaagctgacctttctaaggctcac
gccaaagcagcgttggaagcgactctggcggcgattactgagtctctgaaagaaggtgat
gcagtacaattagtcggttttggtactttcaaagtcaatcatcgtaatgagcgcactggc
cgcaatccgcaaacgggtaaagaaatcaaaattgctgctgccaatgtgcctgcttttgta
tccggtaaagcattgaaagacgctgtaaaataa
DBGET
integrated database retrieval system
