Prodigiosinella confusarubida ATCC 39006: Ser39006_003115
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Entry
Ser39006_003115 CDS
T05290
Symbol
srlR
Name
(GenBank) transcriptional regulator
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_003115 (srlR)
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Ser39006_003115 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
FeoC
HTH_AsnC-type
HTH_24
GntR
HTH_20
HTH_Mga
Put_DNA-bind_N
HTH_5
DDRGK
MarR
MarR_2
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AUH06710
UniProt:
A0A2I5TCT3
LinkDB
All DBs
Position
673554..674318
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AA seq
254 aa
AA seq
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MKPKQRQAEILEYLQANGKASVEDLSSQFATTGTTIRKDLTILEDEGAVIRTYGGVVLSR
EEGDQPIDRKTHINTAKKKQIAYAAVQLINDGDSLIFDAGSTVLQMVPWLTQFNNITVMT
NSLSIVNELVELDNDQTILMPGGTYRKTSASFHGSLAEAAFSHFNFDKLFIGADGVDINA
GVTTFNELHAVSQAMCRAAQQRILLVDSSKFGRKSPNVVCELSAVDILITDSGISPEYLD
TLRAKGINVILVGE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctaagcagcgtcaggcagagatcctggaatatctgcaagcaaacggtaaagcc
tcggtggaagacttatccagtcagtttgccacgaccggtacgactatccgaaaggatttg
actattctggaagacgagggcgccgtaatccgcacttatggcggtgtggtactcagccgt
gaagaaggcgatcagccgattgatcgtaaaacccacatcaataccgccaagaaaaaacag
attgcttatgccgccgtgcaactgattaatgacggcgactcgctgatttttgatgcgggc
agtacagtgctgcaaatggtgccctggctgacacaattcaataatatcaccgtgatgact
aacagcctgagcatcgtgaatgaattggttgagctggataatgatcaaaccattctgatg
ccgggaggaacgtaccgtaaaacgtccgcgtcttttcacggcagtctggcggaagccgct
ttttcccatttcaactttgacaaactgtttatcggtgcggatggcgttgatatcaatgcc
ggtgtaacgacattcaatgagcttcatgcggtcagtcaggcgatgtgccgcgccgcccag
caacggattcttctggtggactcgtccaaattcggccgtaaaagtccgaatgtcgtctgt
gagctgagtgcagtggatattttgattaccgacagcggcattagcccggaatacctcgac
acattgagggcgaagggaatcaatgtgattctggtgggagagtga
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