Prodigiosinella confusarubida ATCC 39006: Ser39006_006435
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Entry
Ser39006_006435 CDS
T05290
Name
(GenBank) glycosyltransferase family 2 protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_006435
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sera01005
]
Ser39006_006435
Lipopolysaccharide biosynthesis proteins [BR:
sera01005
]
O-antigen repeat unit
Ser39006_006435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
AUH03805
UniProt:
A0A2I5TGV7
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All DBs
Position
1402026..1402904
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AA seq
292 aa
AA seq
DB search
MKIGIVVVWYKPTLEQINNMKNIVGNNQFKICIVDNTPDVDNVFYFNELLANGNNYYIYN
GNKGGIAGGFNRGAEKLFEDSDVDYFFTMDQDSSLTSDFFLGMYSFCKEKKSEISCPNFY
DRNAKVYGSFVLLTPYFYKISTDGTTNFCISSGMCISRRAWELVGPFDESLIIDHVDTAF
ALKALVFGFIIKVNYDECLNHAIGEREVHKLFGITVKPNHHNYIRKYYIVRNGFYLSFKY
FKEAKGYFNLNVLRVMHEFVSVIFYEKDKIRKIKYMLKGLLDAVRGKLGDIK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaagataggaattgttgttgtatggtataagcctacactagaacaaatcaataatatg
aagaatattgtaggcaacaatcaatttaaaatatgtattgttgataatacaccagatgtg
gataatgttttttattttaatgagttgttagcgaacggaaataattattatatatataat
ggaaacaaaggcggtattgctggaggatttaatcgtggggcggaaaagttatttgaagat
agcgatgtagattatttcttcactatggatcaggattcctctctaacttctgactttttc
ctgggaatgtattcattctgtaaagagaaaaaatcagagatatcctgccctaatttttat
gatagaaatgctaaggtctatggcagttttgttttattgactccctatttttataaaata
tctacagatggcactacgaacttctgtatctcctctgggatgtgtatttctcgtcgtgca
tgggagctggtaggtccatttgatgagtcattaataatagatcatgttgatacagcattt
gctctaaaggcattagtatttgggtttattataaaggttaattatgatgaatgtcttaac
catgccattggggaaagagaggttcataagttatttggcattacagttaaacctaatcat
cataattacataagaaaatattacatagtgagaaatggtttttatttgtcttttaaatat
tttaaagaggctaaaggatattttaatttaaatgtattaagggtaatgcatgagtttgtt
tctgttattttctatgaaaaagataaaataagaaaaattaaatatatgcttaaaggtttg
ctcgatgctgtaagggggaaactaggtgatattaaataa
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