Prodigiosinella confusarubida ATCC 39006: Ser39006_009060
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Entry
Ser39006_009060 CDS
T05290
Name
(GenBank) IscS subfamily cysteine desulfurase
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00730
Thiamine metabolism
sera01100
Metabolic pathways
sera01240
Biosynthesis of cofactors
sera04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Ser39006_009060
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Ser39006_009060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sera03016
]
Ser39006_009060
03029 Mitochondrial biogenesis [BR:
sera03029
]
Ser39006_009060
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sera02048
]
Ser39006_009060
Enzymes [BR:
sera01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Ser39006_009060
Transfer RNA biogenesis [BR:
sera03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
Ser39006_009060
Prokaryotic type
Ser39006_009060
Mitochondrial biogenesis [BR:
sera03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Ser39006_009060
Prokaryotic defense system [BR:
sera02048
]
DNA phosphothiolation system
Sulfur modification proteins
Ser39006_009060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AUH04257
UniProt:
A0A2I5TI75
LinkDB
All DBs
Position
1961578..1962792
Genome browser
AA seq
404 aa
AA seq
DB search
MKLPIYLDYSATTPADPRVAEKMMQFLTLDGTFGNPASRSHRFGWQAEEAVDIARNQIAE
LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE
VTYLAPQRNGIIDLNVLEAAMRDDTILVSIMHVNNEIGVVQDIATIGEMCRSRGIVFHVD
ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRIRIEAQMHGGGHERGMR
SGTLPVHQIVGMGEAYRIAKEEISTESARLRALRDRLWNGIKDMEEVYLNGSLEQGTPNI
LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLSDELAHSSIRFSLGRF
TTEEEIDYTIKLVRKSIGRLRDLSPLWEMFKQGVDISSIEWAAH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacctatttatctggactactcagcgacaacgccagccgatccgcgtgtagct
gaaaaaatgatgcagtttttgaccctggacggaacttttggcaacccggcttcccgttcc
caccgtttcggttggcaggcagaagaggcggtcgatattgcccgtaaccagattgccgag
ctggttggcgcggatccgcgtgaaatcgtatttacttccggtgcgacagaatccgataat
ctggctatcaaaggtgctgccaatttctaccagaaaaaaggcaagcatatcattaccagc
aaaactgaacataaagcggtgctggatacctgccgccagttagagcgcgaaggttttgaa
gtgacttatctggctcctcaacgtaacggaattattgacctgaacgtgcttgaagcggcc
atgcgtgatgacaccattctggtttccattatgcatgttaataacgaaatcggcgtggta
caggatattgcgactatcggtgaaatgtgccgtagccgtggtatcgttttccatgtggat
gctactcaaagtgtcggcaaactgcctatcgatctgagtcagttgaaagttgatctgatg
tctttttccggtcacaaaatttatggcccgaaagggatcggcgcactgtatgttcgtcgt
aaaccgcgtattcgcattgaagcgcagatgcatggtggcggccacgagcgcggcatgcgt
tccggcacgttgccagtacatcagatcgttggtatgggtgaagcttaccgtattgccaaa
gaagaaatatcgacggaatctgctcgtctgcgagcgctacgcgatcgcctatggaatggc
atcaaagatatggaagaagtttatctgaatggctccctggagcagggaacaccgaatatc
ctgaatgtcagctttaactatgtggaaggtgagtccttgattatggcgctcaaggatctg
gcggtttcttccggttccgcctgtacctcagccagcctggaaccgtcttatgtattacgt
gcgctggggttgagtgatgaactggcgcatagttcgatccgcttctcgctgggtcgtttc
actactgaagaagaaatcgactacaccattaagctggttcgtaaatctattggtcgtctg
cgcgatctttctccattgtgggaaatgttcaagcagggtgtagatattagcagcatcgaa
tgggccgcacattaa
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