Prodigiosinella confusarubida ATCC 39006: Ser39006_010815
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Entry
Ser39006_010815 CDS
T05290
Name
(GenBank) glycosyltransferase
KO
K18101
rhamnosyltransferase subunit B [EC:2.4.1.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ser39006_010815
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sera01003
]
Ser39006_010815
Glycosyltransferases [BR:
sera01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Ser39006_010815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EryCIII-like_C
Glyco_transf_28
Glyco_tran_28_C
UDPGT
Glyco_trans_1_3
Motif
Other DBs
NCBI-ProteinID:
AUH04570
UniProt:
A0A2I5T6N6
LinkDB
All DBs
Position
complement(2346445..2347698)
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AA seq
417 aa
AA seq
DB search
MKIFLATLGSAGDVYPFIAIGESLIQAGYDVYLCTNPFFEKTALERHLKFISVGTNENYL
AAVNSKRLWHPKYAYKEICHFMMQQQQPLYDALNSVTDESSIILTSLWAFSAKMLSEKKG
CCVIPVRVSPSTLMSAYETALHRYTAWLSHFPIRIRRIVLGLIERYIIDRELAPYINQFR
VSIGLPKIHKILTSWTHKTDSNVICLFPDWFAAPQPDWPRHIKQVGFPLFNLLAHQETDD
LDCFFNASNKTVIFMPSWALSANNSVVAELIVKVRKKGFQCLIIGNKNSLYDHDKGIRIE
NHINLEKYLHRCVAIIHHGGIGTTAQSFFAGIPQLIIPSAFDQFDNARRISNLNCGLALS
ETDDAILDEKLGRILFDRSIAQHCCYIKNQFQANQNVYEQIVAIVRAAQLNHNTPMV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttttggccaccctaggttccgcgggtgatgtttatccttttatcgccatt
ggcgagtcacttatacaagccggttatgatgtttatctttgtaccaacccttttttcgaa
aagaccgcacttgaaaggcatctaaaatttatttccgtgggtaccaatgaaaattatctg
gccgctgttaactccaaacgattgtggcatccgaaatatgcctataaagaaatttgtcac
ttcatgatgcaacaacaacagccgctttatgatgcactgaatagcgtgacagatgaatcc
tcaattatactgacttctttatgggcgttttctgccaagatgttaagtgagaaaaaaggc
tgctgtgttattcccgtcagagtcagcccttcaactctcatgtcagcttatgaaaccgcg
cttcatcggtatactgcctggttatcacactttccgatcagaatccgtagaatcgtgcta
gggctaatcgaaagatatattatcgatcgggaattagccccctatattaatcagtttcgc
gtatctatcggcttgcctaaaattcataaaatcctcacatcctggacgcataaaacagat
tccaatgttatttgtcttttcccagactggttcgccgcgccacaacctgactggccgcga
catattaaacaggtcgggtttcctctgtttaatttattagcgcatcaggaaaccgatgat
ctggactgtttttttaatgccagtaacaaaaccgtcatatttatgccaagctgggcactt
agtgctaataacagcgtggtagctgagttaatagtaaaagtcagaaaaaaaggatttcaa
tgtcttattattgggaataagaattcactttatgaccatgataaaggcattcgtattgag
aaccacatcaatttggaaaaatatctgcatcgttgtgtcgctattatccatcacggcggt
attggtacgaccgcgcaatctttcttcgcgggcatacctcaactgattatccccagcgca
tttgatcagttcgacaatgcacggcgcatcagcaatcttaactgtggtttggccctcagt
gagacagacgacgctatccttgacgaaaagctgggacgcattttatttgaccgctccatc
gcccaacattgttgctacataaaaaaccagtttcaggcaaatcagaatgtgtacgagcaa
atagtcgccatcgtgcgtgccgcacaactgaatcacaacaccccgatggtctga
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