Prodigiosinella confusarubida ATCC 39006: Ser39006_016625
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Entry
Ser39006_016625 CDS
T05290
Name
(GenBank) tRNA dihydrouridine(16) synthase DusC
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sera03016
]
Ser39006_016625
Transfer RNA biogenesis [BR:
sera03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Ser39006_016625
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
AUH05614
UniProt:
A0A2I5TM25
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All DBs
Position
complement(3638579..3639514)
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AA seq
311 aa
AA seq
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MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFLRVVDQRLPVKSFYRICPELQHASQTP
SGTPVRVQLLGQYPQWLAENAARAVELGSWGVDLNCGCPSKLVNGSGGGATLLKDPELIY
QAAKAMRDAVPEHLPVTVKVRLGWDSGDARFEIADAVQQAGASELAVHGRTKEDGYRSDR
INWLAIGEIRQRLRIPVIANGDIRDWESAQACMTITGCDAVMIGRGALNVPNLGRVIKYN
EPRMPWPQVLALLQKYVRLEKQGDTGMYHVARIKQWLGYLRQEYAEATGLFSEIRSLNRS
AAIAQAINVAC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttactggccccgatggaaggtgtgctagattccctggtacgggaattgctt
accgaagtgaacgactatgatctgtgcatcaccgaatttttgcgagtggtggaccaacgc
ttgccagtaaagtcgttctatcgtatttgtccggaactacaacacgccagccagacgcct
tccgggacacccgtccgggtacaactgctaggacaatatccgcagtggttggcggagaac
gctgcccgggcagtagagttaggatcctggggtgttgatctcaactgcggctgtccgtca
aaattggtgaacggcagtggcggtggagcaacgttgttaaaggatcccgagctgatttat
caagccgccaaagccatgcgtgacgcggtacctgaacatttgccggtcacagtgaaagtc
cgtttggggtgggatagcggtgacgcacgatttgagattgctgacgcggtacagcaagcg
ggagccagtgagctggcggttcatggtcgcaccaaagaagatggctaccgttctgatcgc
atcaactggctggcaatcggtgaaattcgccagcgcctgcgcattccagtgatcgctaat
ggtgacattcgggattgggaaagtgcacaggcgtgtatgacaataaccggttgtgatgcg
gtgatgattggtcgtggcgcactgaatgtgcccaatcttggtcgggtgattaaatataat
gaacctcggatgccatggccacaggtgttggcgctactacaaaaatacgttcggctggag
aaacaaggggataccggcatgtatcacgtcgcccgcatcaaacagtggctgggatattta
cgccaagaatatgcagaagcaaccgggttgtttagtgagattcggtcattgaaccgctct
gcggccattgcgcaggctattaatgttgcttgttga
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