Prodigiosinella confusarubida ATCC 39006: CWC46_00220
Help
Entry
CWC46_00220 CDS
T05968
Name
(GenBank) LysR family transcriptional regulator
Organism
serq
Prodigiosinella confusarubida ATCC 39006
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR
HTH_28
DUF2089
HTH_3
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
AUG98383
UniProt:
A0A2I5TDQ4
LinkDB
All DBs
Position
51488..52411
Genome browser
AA seq
307 aa
AA seq
DB search
MSDWTQKLKVHHLRLLVCIGDQGNLSQVATMMNITQPALSKWLSALEEEIGLTLFERHSK
GLRPSAGGRLMLEHARRILNDLERSRVDIEQFKQGSQGSLIVGCSPVATDCVAMALLPLT
ADYPTLRLHVVENVMTPLLQSLLSGKIDVAVGRVGGRALELPLNYRVLYTEPICFVSGRN
HPLVQRNSISWHELLSYRWVVWPTGTPIRVSIDNALVEHGAMLPDDYLECSSMSVTLNMV
QASEMVSILSWRLARRYEAQGQLAILPLPRIEQKGSVGVFWRKRETPSGVLQRFLTHLLA
TAGDDRN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgactggacccaaaaactgaaggtgcatcatctgcggctgctggtgtgtatcggc
gatcaaggcaacctctcgcaggtcgccacgatgatgaatatcactcagccggccttatca
aaatggctcagcgcattagaggaggagatcggcctgacattgttcgaacgccacagtaaa
gggctgcgtccctccgcaggcgggcggctgatgctggaacacgcacggcgtatcctcaat
gatctggaacgctctcgtgtcgatattgagcagtttaaacaggggtctcagggcagcctg
atcgtcggttgctccccggtggcgacagattgcgtcgccatggcgcttttgccactaacg
gcagactacccgacgttacggctacatgtagtggaaaacgtgatgacaccgctgctgcaa
agtctgctctccggcaagatcgatgttgcagtgggacgtgttggcggccgggcactggag
ttgccactgaattatcgggtgctgtataccgaacccatctgcttcgtcagtgggcggaat
catccgttggtgcagcgaaacagcatcagttggcatgaattacttagctatcgatgggtt
gtctggccgacgggtacgcctatccgggtgagtatcgacaatgcgttggtggagcatggc
gccatgttgccggatgattacctggagtgttcatccatgagcgtcaccctcaacatggta
caggccagtgaaatggtatcgatcctctcctggcggctggcacgacgttacgaggcacaa
gggcaactggcgattttacccctgccacgcattgagcagaaaggcagcgtcggtgtgttc
tggcgcaaacgcgaaacgccttccggcgtgctgcaacggtttctgacacacctgctcgcc
accgctggtgatgaccgtaattag
DBGET
integrated database retrieval system