Prodigiosinella confusarubida ATCC 39006: CWC46_02270
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Entry
CWC46_02270 CDS
T05968
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serq03032
]
CWC46_02270
03036 Chromosome and associated proteins [BR:
serq03036
]
CWC46_02270
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_02270
DNA replication proteins [BR:
serq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CWC46_02270
Chromosome and associated proteins [BR:
serq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CWC46_02270
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CWC46_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AUG98748
UniProt:
A0A2I5T2G1
LinkDB
All DBs
Position
complement(495523..495795)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIADKADLSKAHAKAALEATLAAITESLKEGDAVQLVGFGTFKVNHRNERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactcaactgattgatgtaattgctgataaagctgacctttctaaggctcac
gccaaagcagcgttggaagcgactctggcggcgattactgagtctctgaaagaaggtgat
gcagtacaattagtcggttttggtactttcaaagtcaatcatcgtaatgagcgcactggc
cgcaatccgcaaacgggtaaagaaatcaaaattgctgctgccaatgtgcctgcttttgta
tccggtaaagcattgaaagacgctgtaaaataa
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