Serratia sp. SCBI: SERRSCBI_01940
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Entry
SERRSCBI_01940 CDS
T03314
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sers
Serratia sp. SCBI
Pathway
sers00550
Peptidoglycan biosynthesis
sers01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SERRSCBI_01940
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sers01002
]
SERRSCBI_01940
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sers01011
]
SERRSCBI_01940
Enzymes [BR:
sers01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SERRSCBI_01940
Peptidases and inhibitors [BR:
sers01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SERRSCBI_01940
Peptidoglycan biosynthesis and degradation proteins [BR:
sers01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SERRSCBI_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AIM20027
LinkDB
All DBs
Position
complement(446512..447945)
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AA seq
477 aa
AA seq
DB search
MRFSRIVSALACAFVLNANAAPVEEYTQYLPDGANLALVVQKIGASSPTIDYHSQQMALP
ASTQKVLTALAALLQLGPDYRFTTTLESQGDIRDGVLRGNLIARFSGDPTFKRQSLRNMV
AVLKKQGVRQISGDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
APNPGDMAFIRVASYYPVNMFSQVRTLARGSADAQYCELDVVPGELNRFTLTGCLTQRSE
PLPLAFAIQDGASYAGAILKDELTQAGIQIDGHLKRQTRPGITGTVIAQTQSAPLHDLLK
IMLKKSDNMIADTVFRTIGHERFGVPGTWRAGSDAVRQVLRQKAGIDLGNTIIADGSGLS
RHNLLAPATMMQALQYIAQHDNELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKQRRAPLVRFESRLYRDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcacgaattgtcagtgcattggcttgcgcatttgttctgaatgcgaatgcg
gccccggttgaagagtacacacaatatctgcctgatggggccaaccttgccctggtcgtt
cagaagatcggcgccagctcgccgacgatcgattaccactctcagcaaatggcgctgccg
gccagtacccaaaaagtgctgacggcgctggcggcattgctgcaactcgggcccgattac
cgtttcactaccacgctggagagccagggcgatatccgcgacggcgtgctgcgcggcaac
ctgatcgctcgcttcagcggcgatccgaccttcaaacgccagagcctgcgcaatatggtg
gccgtcctgaaaaagcaaggcgtgcgccaaatcagcggcgacgtgctggtcgatacctct
gtcttcgccagccatgacaaagcgcccggttggccgtggaacgatctgacgcagtgcttc
agcgcgccgccggccgccgccatcgtcgatcgcaactgtttctcggtctcgctgtacagc
gcgccgaatccgggcgacatggcgtttatccgcgtcgcctcctattatccggttaatatg
tttagccaggtgcgcaccctggcgcgcggctcggcagacgcgcagtactgcgagctggac
gtggtgccgggcgagctgaaccgctttaccctgaccggctgcctgacgcagcgcagcgag
ccgttgccgctggccttcgccatccaggacggcgccagctatgcgggcgccatcttgaaa
gacgagctgacgcaggccggcatccagatcgacgggcatttgaaacgccagacgcgtccc
ggcattaccggcacagtgatcgcgcaaacccagtcggcaccgctgcacgatctgttgaag
atcatgctgaagaagtcggacaacatgattgccgataccgtcttccgcaccatcggccat
gagcgcttcggcgtgccgggcacctggcgagcgggctccgatgcggtgcgccaggtactg
cgccaaaaggccggcatcgatctgggcaataccatcatcgccgacggttccggcctgtcg
cgccacaacctgctcgccccggcgaccatgatgcaggcgctgcagtacatcgcgcagcac
gacaacgagctgaactttatctcgatgctgccgctgtccggctatgacggcaccctgcgc
taccgcggcggcctgcatgaagccggcgtcgacggcaaggtgtcggccaagaccggcgcg
ctgcagggcgtctacaacctggcgggcttcatcacgaccgccagcggccagcgcatggcc
ttcgtgcagtatctctccggctacgccgtgccgccggaagatcagaaacagcgccgcgcg
ccgctggtgcgcttcgaaagccgcctgtatcgggatatttaccaaaacaactga
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