Serratia sp. SCBI: SERRSCBI_17950
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Entry
SERRSCBI_17950 CDS
T03314
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sers03009
]
SERRSCBI_17950
Enzymes [BR:
sers01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
SERRSCBI_17950
Ribosome biogenesis [BR:
sers03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SERRSCBI_17950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AIM23166
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All DBs
Position
3826476..3827411
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AA seq
311 aa
AA seq
DB search
MLTNSSIRLNKYISESGICSRRDADRYIEQGNVFINGKRATVGAQVFAGDVVKVNGQLIE
PRNEEDLVLIALNKPVGIVTTTEDGERDNITDFVNHSKRIFPIGRLDKDSQGLIFLTNHG
DLVNKILRAGNNHEKEYLVTVNKPVTDEFIRGMGAGVPMLGTVTKKCKVKKEAPFVFRIT
LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLKGLPLGEWRDLTDDELIELFKLIEGSS
SEAKPTKKAPAKSAPAKNRAPADRKAPIKPLRRPAASALPSQDARKKGVKRPSLLSPPLR
GLGEGETLTTT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctgactaactcatccattcgtctgaacaaatacattagcgagagcggtatctgctca
cgccgcgacgccgatcgatacatcgaacagggcaacgttttcatcaacggtaaacgcgcc
accgttggcgcccaggtatttgccggcgatgtggtgaaggttaacggtcagctgatcgag
ccgcgcaatgaagaagatctggtgctgatcgcgctgaacaaaccggtcggcatcgtcacc
accaccgaggacggcgagcgcgacaacatcaccgacttcgtcaaccacagcaagcgcatc
ttcccgatcggccgcttggacaaggattcgcaggggctgatctttctgaccaaccacggt
gacctggtcaacaagatcctgcgcgccggcaacaatcacgagaaagagtatctggtgacg
gtcaacaaaccagtgaccgacgagtttattcgcggcatgggcgccggcgtgccgatgctt
ggcacggtgacaaaaaaatgcaaggtgaagaaagaagcgccgttcgtgttccgcatcacg
ctggtgcaggggctgaaccgccagatccgccgcatgtgcgaacacttcggctatgaggtc
accaagctggaacgcacgcgcatcatgaacgtcagcctgaaaggcttgccgctgggcgaa
tggcgcgatctgaccgatgacgagctgattgagctgttcaagctgattgaaggctcttcg
tccgaggctaaaccgacgaagaaagccccggccaaatctgccccggcgaaaaaccgagcg
ccggcggaccgaaaagcgccgataaaaccgctgcgccggccggccgcaagcgctttaccc
agccaggacgcaagaaaaaagggcgttaaacgtccttccctgctcagcccgccgttgcgc
gggcttggcgagggcgaaaccctgaccaccacctag
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