Ornithinimicrobium pratense: FY030_11085
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Entry
FY030_11085 CDS
T06221
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03420
Nucleotide excision repair
serw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FY030_11085
03430 Mismatch repair
FY030_11085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_11085
Enzymes [BR:
serw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FY030_11085
DNA repair and recombination proteins [BR:
serw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FY030_11085
MMR (mismatch excision repair)
Other MMR factors
FY030_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QFG69176
UniProt:
A0A5J6V7T6
LinkDB
All DBs
Position
complement(2413148..2416441)
Genome browser
AA seq
1097 aa
AA seq
DB search
MTATTAEQGLRFSALDLAAALGTPPPTPEQQAVIEGPLRPTVVVAGAGSGKTETMAARVV
WLVANGLVAPQDVLGLTFTRKAALELGARLSSKLRRLREVGFWVDTDQAEDDASADGIGF
DLPTISTYHAYAGRLVDEHGLRLGVEPDSVLLSEAACWQLAHDLVHRHEGDLPGLTSAPA
TVVRAVLALAGELGEHLVEPEEAARFLTRVADRLVDLGHEGQPLKVGEKTAETLRVQALL
YPLVEDYRRAKAARGALDFGDQMALAARLARDVPDVGEAERTRFRAVLLDEFQDTSEAQM
VLLTSLFAGHDLSVTAVGDPHQSIYGWRGASATTLTRFPTEFALDGTPAAVLQLTTSWRN
DRLILDAANAVAAPLREATEVPVATLRPGPGAEEGMVEVARVLDHIGEAELVADWVQERW
AEPTTATAAVLCRARAQFPAVVDALRRRGLPVEVVGLGGLLDTPEVLDLVALLWLAQEPT
RGDQAMRLLAGPVCRLGAADIDALWAWARVDARQGGAEAAGERGHAPVLAEAVEHPPPDG
WVGPGGEHVSPEGQARVGWLSGVLGAVRRLTGLPLPDLVTEGERLLGLDIEVASDPDLHP
SWGRAPLDALADVAAGYAAGADRVTLGGFLDWLDAAREHERGLEGVEVPELAEVSVDTSA
VQVLTVHAAKGLEWDAVAVPGLAEGTFPSGRVTPVFADGRWQVKERREKGWLAGIGRLPT
PLRGDRQGRPDIGWLSVPHTRALRSELEELELAQGRFSVQEERRLAYVAYTRARHRMLLT
APIWSTGTRPRVTSRFLEDLRMLPGVRARAWLEMPDPDDPDQMSNPRLAEQLTATWPLER
GERRRAVLDVSTALLSAREASSQGVLPLEMEGDRWAELVELLLAERAERSRHLDGTVVPE
HLSTSSLVELASDPDGFRRRLRRPLPTPPASQARVGTAFHAWVEQHYAAATLVDLHDLEL
DDTQEPADLEQLRRAFLASEWADRSPVAVEVALETVVGGRSVRGRVDAVFPDPDGGVTIV
DWKTGSPGSAGEQRQRALQLAVYRIAYARLTGRDPEQVRAAFFYARSGETVRPPLPGEPE
IELLVHELVAGGSSDLA
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacgacggcggagcaggggctgcgcttctcggcgctggacctggctgcggcg
ctgggcactccaccgcccaccccggagcagcaggccgtgatcgaggggccgttgcggccc
accgtcgtggtggccggggccgggtcgggcaagaccgagacgatggccgcccgggtcgtc
tggctggtcgccaacgggctcgtcgcgccccaggacgtgctcgggctgaccttcacccgc
aaggccgcgctcgagctaggtgcgcggctcagcagcaagctgcgccggctgcgggaggtc
gggttctgggtggacaccgaccaggccgaggacgacgcctccgcggacggcatcggtttc
gacctgcccaccatctccacctaccacgcctacgccggccggctcgtcgacgagcacggg
ctgcggctgggcgtggagccggactcggtgctgctgtccgaggccgcctgctggcagctc
gcccacgacctggtgcaccggcacgagggggacctgccgggtctcacctcggcccccgcc
acggtggtgcgggcggtcctcgccctggccggtgagctgggcgagcacctggtcgagccg
gaggaggccgcccgctttctcacccgggtggccgaccggctcgtcgacctcgggcacgag
ggccagccgctcaaggtcggggagaagacggcggagacgctgcgggtccaggcgctgctc
taccccctcgtcgaggactaccgacgggccaaggccgcccgtggtgccctggatttcggt
gaccagatggcgctggcggcccgcctggcccgggacgtccccgacgtgggggaggccgag
aggacacggtttcgggccgtgctcctcgacgagttccaggacacctccgaggcccagatg
gtcctgctcacctcgctgttcgccggccacgacctgagcgtcaccgcggtcggtgacccg
caccagtccatctacggctggcgcggcgcgagcgccaccacgctgacgcggttcccgacc
gagttcgccctcgacggcaccccggccgcggtgctgcagctcaccacctcctggcgcaac
gaccggctgatcctggatgcggccaacgcggtcgcagccccgctgcgtgaggcgacggag
gtgccggtggccacgctgcgccccggcccgggggcggaggagggcatggtcgaggtggcg
cgggtgctggaccacatcggcgaggccgagctggtcgccgactgggtgcaggagcggtgg
gccgagccgacaacagccacggcggcggtgctctgccgggcccgtgcccagttcccggcg
gtggtcgacgcgctgcgccgacgtgggctgccggtcgaggtggtgggtctgggcggcctg
ctcgacacccccgaggtgctcgacctggtggccctgctctggctggcccaggaaccgacc
aggggcgaccaggcgatgcgcctgctcgccggcccggtgtgccggctgggggcagcggac
atcgatgcgctgtgggcctgggcccgcgtcgatgcccggcagggtggcgccgaggcggcc
ggcgagcgcgggcacgctcctgtcctggccgaggcggtcgagcatcctccaccggacggg
tgggtgggcccggggggcgaacacgtcagcccagagggtcaggcgcgggtcgggtggttg
agcggcgtgctcggcgccgtccgccgcctgaccggcctgccgctgcccgacctcgtcacc
gaaggggagcggctgctggggctggacatcgaggtggcctccgaccccgacctgcacccc
agctgggggcgggcaccgctggacgccctggccgacgtcgcggcagggtatgccgccggg
gccgaccgggtgaccctcggcggcttcctggactggctggacgcggcgcgggagcacgag
cgcggcctggagggtgtcgaggtccccgagctggccgaggtcagcgtggacacctcggcc
gtccaggtgctgaccgtgcatgcggcgaaggggctggagtgggacgccgtcgcggtgccc
gggctggcggagggcaccttcccgtccggccgggtcacccctgtcttcgccgacgggcgc
tggcaggtcaaggaacgccgcgagaagggctggttggccgggatcgggcggctgccgacc
ccgctgcgcggcgaccggcagggccgtcccgacatcggctggctctcggtgccgcacacc
cgagccctgcgcagcgagctggaggagctcgagctcgcgcagggacggttctcggtgcag
gaggagcggcggctcgcctacgtcgcctacacccgggcccggcaccggatgctgctgacc
gcgcccatctggtccacgggcacccgtccacgggtcacctcccggttcctggaggacctg
cggatgctcccgggcgtgcgtgcccgggcgtggctggagatgcccgaccccgacgacccg
gaccagatgtcgaacccgcgcctagccgagcagctcacggcgacctggccgttggagcgc
ggcgagcgccgacgggccgtcctggacgtgtcgaccgcgctgctgtcggcgcgggaggcg
tcgagccagggtgtgctgcccctggagatggagggagaccgctgggctgagctcgtcgag
ctgctgttggccgagcgggccgagcgctcccgccacctggacggcacggttgtgccggag
cacctgtcgacctcatcgctggtcgagctggcgagcgacccggacggtttccgtcggcgc
ttgcggcgtccgctgcccaccccgccggcgtcgcaggccagggtaggcaccgccttccac
gcctgggtcgagcagcactacgccgccgcgacgctggtggacctgcacgacctggagctg
gatgacacacaggaacccgccgacctggagcagctgcggcgggccttcctcgccagcgag
tgggccgaccgctcaccggtggcggtcgaggtggccctcgagaccgtcgtcggcggacgc
agcgtgcgaggccgggtggacgccgtcttcccggaccccgacgggggagtgaccatcgtg
gactggaagaccggctcacccggctccgccggcgagcagcggcagcgcgcactgcagctg
gccgtctaccggatcgcctacgcgcggctgacgggccgcgaccccgagcaggtgcgcgca
gccttcttctacgcgcgcagcggtgagacggtccgaccgcccctccccggggagccagag
atcgagctcctggtgcacgagctggtcgccggcgggagcagcgacctcgcctga
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