Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_00480
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Entry
STU288_00480 CDS
T02639
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setu03021
]
STU288_00480
Transcription machinery [BR:
setu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
STU288_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGK07714
LinkDB
All DBs
Position
complement(109708..112614)
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSPEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEET
DGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgagctgggacttgga
accgttgttgcgatggatgcgcgaaccgtcaccttacttttcccgtccacgggggaaaac
cgcctgtatgcgcgcagtgattctcccgtgacccgcgtcatgttcaaccctggcgatacg
attacaagccatgaaggctggcagctacatatcgatgaagtaaaagaagaaaatggcctg
cttgtttatgtcggcacccgcctggataccgaagagaccaatgtgacgttgcgcgaagtt
ctgctcgacagcaagttggttttcagtaagccccaggatcgtctgttcgccggtcaaatc
gatcgaatggatcggttcgcgctgcgctatcgcgcccgtaaatttcagagcgagcagtac
cggatgccatacagcggtctgcgcggtcagcggaccaatctgatcccgcatcagcttaat
atcgctcatgatgtaggtcgtcgccacgcgccgcgcgtactgctggcggatgaagtgggc
ttaggtaaaaccattgaagccgggatgattctgcatcaacagttattatccggcgcggcg
gaacgcgtattgatcatcgttccggaaaccctgcaacaccagtggctggtagaaatgctg
cgccgtttcaacctgcgcttcgcgctgttcgatgacgaacgctataccgaagcgcagcac
gacgcgtataacccgtttgaaaccgaacaactggtgatctgctcgctggatttcgcccgc
cgtaataagcagcgtctggaacatttgtgcgacgccgagtgggatctgctggtggtcgac
gaagcgcatcatctggtgtggagtaccgatgcgccgagccgtgaatatatggccatcgaa
cagttagctgaacgcgtaccgggcgtgctgctgctgaccgccacgccagaacagctgggg
atggaaagccatttcgcccgtctgcgcctgctggatccgaaccgtttccacgatttcgaa
cagtttgtcgaagaacagaaaaactaccgacctgtcgccgatgcggtggccatgctgctg
gcgggcaataaactcagcaacgacgaactgaacaggctgggcgatctgatcggcgaacag
gatattgaaccgctgttgcaggccgctaatagcgatcgcgacgatgcgcaggccgcccgt
gatgagctggtgtcgatgctgatggatcgccacggcaccagccgcgttctgttccgcaac
acccgtaacggcgtcaaggggttcccgaaacgtgaactgcatacggtaaaactgccgctg
ccgacccagtatcagaccgccattaaggtctccggcattatgggcgcgcgtaaaagcccg
gaagatcgcgcccgcgatatgctctatccggaacaaatttatcaggagttcgaaggcgat
accggcacctggtggaacttcgacccacgcgttgagtggctaatgggctatctgaccagc
catcgttcgcaaaaagtgctggtgatctgcgccaaagcgaccaccgcgttacagctggag
caggtgctgcgcgaacgcgaaggcatccgcgccgccgtgttccatgagggcatgtcgatt
atcgaacgcgaccgcgccgccgcctggttcgccgaagaagataccggcgcgcaggtgctg
ttatgttccgaaatcggctccgaaggacgtaacttccagtttgccagcaatctggtgatg
ttcgacttgccgtttaacccggatctgctggaacagcgtattggtcgtctggatcgcatc
ggccaggcgcatgatatccagatccacgtcccgtacctggaaaaaaccgcccagtcggtg
ctggttcgctggtatcacgaagggctggacgcctttgagcacacctgtccaaccggccgc
gcgatttatgattcagcctacgccagtctgattaactatctggccgcgcctgaagaaacc
gacgggtttgacgatctgatcaaatcctgccgcgagcaacatgaagcgctaaaagcccag
ttagaacagggccgcgaccgcctgctggagatccactccaacggtggtgaaaaagcccaa
cagcttgcacaaagcattgaagaacaggacgacgacaccaacctgattgcgttcgccatg
aacctgttcgatatcgtcggcattaaccaggacgatcgcggcgacaacctgatcgtgctg
acgccgtccgaccacatgttggtgccggatttccccggcctgccggaagacggctgtact
atcacgtttgaacgtgacgtagccctgtctcgcgaagatgcgcagtttattacctgggaa
catccgctcatccgtaacggactggatctgatcctctccggcgacaccggcagcagcacc
atttcgctgttgaaaaataaagcgctgcccgtcggcacgctgctggtcgaactggtttac
gtcgtggaagcgcaggcgccgaaacagctacaactgaaccgcttcctgccgccgacgccg
gtacgtatgctgttagataaaaacggcaacaatctggccgcccaggtcgagtttgaaacc
ttcaaccgccagctcagcgccgtgaatcgccacaccggtagcaaactggtgaacgccgtt
caacaggacgtccacgccattttgcaactgggcgagacgcagattgaaaagtccgccaga
gcgctgattgataacgcgcgccgcgaggcggatgaaaaactgtccggggaactgtcgcgt
ctggaagcgctgcgcgccgtcaacccgaacattcgcgacgacgaacttgccgctatcgac
agcaaccgtcagcaggtgctggaaagcctgaatcaggcaggctggcgtctggacgcgctg
cgtcttatcgtcgtcacgcaccaataa
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