Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_11140
Help
Entry
STU288_11140 CDS
T02639
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu03030
DNA replication
setu03430
Mismatch repair
setu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STU288_11140 (holA)
03430 Mismatch repair
STU288_11140 (holA)
03440 Homologous recombination
STU288_11140 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setu03032
]
STU288_11140 (holA)
03400 DNA repair and recombination proteins [BR:
setu03400
]
STU288_11140 (holA)
Enzymes [BR:
setu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STU288_11140 (holA)
DNA replication proteins [BR:
setu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STU288_11140 (holA)
DNA repair and recombination proteins [BR:
setu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STU288_11140 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AGK09836
LinkDB
All DBs
Position
2339197..2340228
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTD
WGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKA
QENAAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQ
AVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggttgtatcctgaacaactccgcgcgcagctcaatgaagggctgcgtgcggca
tatctgctattgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctg
gcggctgcgtcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgac
tggggatcgcttttctcactctgccaggcgatgagtctgttcgccagccgtcaaacgctg
gtgctgcaactgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccaccctg
agcgagctgctgcatgacgacctgttattaatagtacgcggaaacaagctcaccaaagcg
caggaaaacgccgcctggtataccgcgctggcagaccgtagcgttcaggtcagttgtcag
acgccggagcaggcgcagcttccccgctgggtggccgccagagcgaaagcacagaatttg
caactggatgacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcg
ctggcgcaggcgctggaacgactgtcgctgctttggcctgacggtaagttaacgcttcct
cgcgtggagcaggccgtcaatgacgccgcccactttacccctttccactgggtggatgcg
ttactgatggggaaaagcaaacgcgcgctgcacattctgcaacagctacgccttgaaggc
agcgaaccggttattctgctgcgcaccctccagcgagagctgctgctactggtaaatctc
aaacgtcagtccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaa
aaccgtcgccccatgatcggcgacgcgttgcagcgtctccatcctgcgcagcttcgccag
gccgtgcagttactgacgcgtacagaaattacgctcaaacaggattatggtcagtcggta
tgggcagatcttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtattt
attgatgggtga
DBGET
integrated database retrieval system
