Saccharomyces eubayanus: DI49_5622
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Entry
DI49_5622 CDS
T08138
Name
(RefSeq) PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_5622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
seub03041
]
DI49_5622
Spliceosome [BR:
seub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DI49_5622
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WDR54
WD40_like
eIF2A
RMC1_N
Motif
Other DBs
NCBI-GeneID:
28934758
NCBI-ProteinID:
XP_018219178
UniProt:
A0A0L8RAJ9
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Position
XVI:850346..851743
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AA seq
465 aa
AA seq
DB search
MSKGVSFENLPVDLQHKSVTQNESTADILSQLPHERLQAVLEKVPEDDVEVRKVLLLLKK
PEVVDNEDVQQRRVRLAEALITDEVDPSGISNTAEVNTEEEDEEDDEEFFTPATSELISA
RKFLVKYSLERSRKRLQAEMQRHQNFNIKEELLSRRAELERMANLELAGSQLVSTRPISA
VSLSPDNDYIATGSWAGDINILNSQTLQPLAQKLDSHIGKIGAVQWHPGSNNQIISCAED
GLIKNFQYLNEEGDLRLLGDLVGHERRVSDLKYHPSGQFIGSASHDMTWRLWDASTYQEL
LLQEGHAKGVFCLSFQCDGSLVCSGGMDSLAMIWDIRSGNKVMSLTGHSKPIYTVDWSTN
GHQVATGGGDGLINVWDIRQRDGGQVHQILAHRNIVTKVQFSKDDNGKKLVSCGYDNLIN
VYSSDNWLKVASLEGHTDKIISLDISNDSQYLVSGGWDRSVKIWN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggtgtttcgtttgaaaatcttccagtggatttgcaacataagagtgttaca
caaaatgaaagtaccgctgatatattaagccagttaccacatgaacgattacaagctgtc
cttgagaaggtgccagaagatgacgttgaagtgagaaaagtactattgttattgaagaag
ccagaagtggtggataatgaagatgtgcagcagagaagggtacgactggctgaagcgctg
ataactgatgaagttgatccatctggtatctcaaatacagcagaagtaaataccgaagag
gaagacgaggaagatgacgaggagttttttacgccagcaacttctgagctaatatctgct
aggaaatttctagtcaaatactcattagagagatctcgaaagaggttacaggcagagatg
caaaggcaccaaaatttcaatataaaggaagagttacttagtcgacgagcggaactagaa
cgtatggcaaatttagaacttgctggatctcaattagtatctactaggcctatatcagcc
gtctctttatcaccggataatgattatatcgcaactggaagctgggcgggtgatattaac
atattgaattctcaaacgctacaaccgttagcacagaaactcgattctcacatagggaaa
attggggctgtacaatggcatcctggatcaaacaatcaaataatatcatgtgcagaagat
ggactcatcaaaaatttccaatacttaaacgaggaaggggacttacggttattgggagac
cttgtggggcacgaaagacgtgtctctgatttgaagtaccatcccagtggtcaatttata
ggcagtgcctctcacgatatgacgtggaggctctgggatgcttccacgtaccaagagctt
ctattgcaagaaggtcatgccaagggggtattctgtttgtctttccaatgtgatggatcg
cttgtttgtagcggtggaatggactcccttgcaatgatatgggacatacgatctgggaat
aaggtgatgtctctaaccggacattcaaaacccatatacactgttgattggtcaacaaac
ggacatcaagtagccaccggtggtggtgatggattgatcaatgtttgggatataagacaa
cgagacggtggtcaagtacaccaaattttggcacaccgaaacatcgttactaaagttcaa
ttctcaaaagacgataatggcaaaaaacttgtatcttgtggttatgataatctgattaat
gtatatagtagtgacaattggttgaaagtggcaagcctggaaggtcatactgataaaatt
attagtttggatatttcaaacgactcccagtatttagtgagcggtggttgggacaggtca
gtgaagatctggaattga
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