KEGG   Saccharomyces eubayanus: DI49_5626
Entry
DI49_5626         CDS       T08138                                 
Name
(RefSeq) SMX3-like protein
  KO
K11098  small nuclear ribonucleoprotein F
Organism
seub  Saccharomyces eubayanus
Pathway
seub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DI49_5626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_5626
   03041 Spliceosome [BR:seub03041]
    DI49_5626
   03032 DNA replication proteins [BR:seub03032]
    DI49_5626
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     DI49_5626
Spliceosome [BR:seub03041]
 Complex A
  U1 snRNP components
   Sm proteins
    DI49_5626
  U2 snRNP components
    DI49_5626
 Complex B
  U1 snRNP components
    DI49_5626
  U4/U6.U5 tri-snRNP components
    DI49_5626
 Complex C
  U2 snRNP components
    DI49_5626
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     DI49_5626
SSDB
Motif
Pfam: LSM DUF6379
Other DBs
NCBI-GeneID: 28934762
NCBI-ProteinID: XP_018219182
UniProt: A0A0L8RAI5
LinkDB
Position
XVI:858120..858380
AA seq 86 aa
MSEASDSNVMQPVNPKPFLKGLVNHRVGVKLKFNNTEYRGTLVSTDNYFNLQLEDTEEFV
AGVSHGVLGEIFIRCNNVLYVRQLPN
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagcgaggccagtgacagcaacgtgatgcagcccgtaaacccgaagcccttcctcaag
ggcctggtcaaccaccgcgtgggtgtcaagctcaagttcaacaacaccgagtacaggggc
acgctcgtgtctacggacaactacttcaacctacaactggaagacaccgaggagttcgtt
gcaggcgtctcgcacggtgtcctgggcgagatcttcatccgctgcaacaacgtgctctac
gtcagacagctgccgaactga

DBGET integrated database retrieval system