Salmonella enterica subsp. enterica serovar Typhimurium SL1344: SL1344_2038
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Entry
SL1344_2038 CDS
T01724
Symbol
dacD
Name
(GenBank) penicillin-binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sey
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Pathway
sey00550
Peptidoglycan biosynthesis
sey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SL1344_2038 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sey01002
]
SL1344_2038 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sey01011
]
SL1344_2038 (dacD)
Enzymes [BR:
sey01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SL1344_2038 (dacD)
Peptidases and inhibitors [BR:
sey01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SL1344_2038 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sey01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SL1344_2038 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
CDPS
Motif
Other DBs
NCBI-ProteinID:
CBW18134
UniProt:
A0A0H3ND84
LinkDB
All DBs
Position
complement(2133740..2134912)
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AA seq
390 aa
AA seq
DB search
MLLKRRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQ
RNPASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSV
RDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQH
SSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSG
AGFNLIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSER
IWYGDKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEIELYDRDK
LIAQWPLVTLESVGKGGMFSRLSDYFQHKA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaaacgccgtttgtttattgccgcttctttattcgcgatgcacctttctcct
gcgcttgcggccgatgccgtaagttttgctccccaaccgccagccattgatgcaggcgcc
tgggtgttgatggattacactacgggacaggttcttaccgccggtaatgaacaccagcaa
cgtaatcccgccagccttaccaagctaatgacgggctacgtcgtcgatcgcgccatcgat
agtcatcgtatcagccctgacgatatcgtcacagttgggcgcgacgcctgggcgaaggat
aatccggtgtttgtcggctcctcgttgatgtttttaaaagaaggggatcgcgtgtcggtg
cgtgatttaagccgtggcttaatcgtggattccggtaacgatgcctgtgtggcgctggcg
gattatatcgcgggcgggcagccgcagtttgtggcgatgatgaacagctatgtgaaaaaa
ctcaatttacaggatacccattttgaaaccgtccacggtctggatgcgccgggacaacat
agctccgcgtatgacctggccgtactctcccgggcgattattcacggcgagcctgaattt
tatcacatgtacagcgagaaaagcctgacctggaacggcatcacgcagcagaaccgtaac
ggcttgttatgggataagaccatgcatatcgatgggcttaaaaccggacacacatcgggg
gcgggatttaatcttatcgcatcggcggtggacgggcagcgtcgacttatcgccgttgtg
atgggggcgaaaagttcgaaaggtcgtgaggaacaggcgcgaaaactgttgcagtggggc
cagcaaaactttgcgacggtgcagattttgcacagcggtaaaaaagtgggcagcgagcga
atctggtatggagacaaagaaaagattgcgctgggtacggaacaggacttctggatggcg
ctgcctaaagcggaaattccgcatatcaaagcaaaatatgtgctggatagaaaagagctg
gaggcgccaatcgccgctcatcaacaggtaggtgaaatagagctctacgatcgggataaa
ctgatcgctcagtggccgctggtcactctggaatcggtgggtaaaggcggtatgttctct
cgtctgagcgactattttcagcataaagcgtaa
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