Sinorhizobium fredii USDA 257: USDA257_c12310
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Entry
USDA257_c12310 CDS
T02188
Name
(GenBank) blue-light-activated histidine kinase
Organism
sfd
Sinorhizobium fredii USDA 257
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
HWE_HK
PAS_3
PAS_8
GAF_2
GAF
HisKA_2
PAS_10
HATPase_c_2
GAF_3
dCache_1
Motif
Other DBs
NCBI-ProteinID:
AFL49822
UniProt:
I3X1R6
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Position
1300170..1302896
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AA seq
908 aa
AA seq
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MCSAETLPKIALGDLSILRSSDFRAALDALAVAVYTTDADGFVTYCNPAAVSLAGREPEL
GQDRWCVSWKLRRPDGTPLPHDECPMAMALKGRQPIRGEELVAVRPDGSTALLLPHPTPI
FDESGELTGAVNLLVDITDHKSAEKDSRYLAAIVESSDDAIVAKDLNGIITSWNKGAERL
FGYTADEVVGKSITILMPPGYENEEPNILRRIRCGERIDHYQTTRRRKDGSLVDISLTVS
PVRDALGRIVGASKIARDITEQRQASETLAARLREQAALYRLTERLHRAQDISEVYEAAL
DAIQGALCCHRASILLFESSAKMHFVAWRGLSAEYRNAVDGHSPWTCEERDPEPIFLQDV
AQAEALTALRPTIEAEGIAALGFIPLVAEGRLIGKFMTYYDLPHAFTDNEIDLALTIARQ
LGFSIQRMRADEARCLAEQQLRRNEANERARAAELMAIMEAVPASIWISRTPDCRVISGN
RAAYELLRQRPDTNLSLSAAPGERPDSFRVFSMGKMLSPDELPVQRAARGEVVPNFEEEV
RFEDGTSRHLFGNATPLRDAAGDVIGAVAASVDITERKQAEEALQESERRLQIALGAGRM
GAWEWNIGTGKVVWSPGLEALHHLEPGTFGGTLDDFKRDIHPDDLCLVELEIARAMESRQ
DYHVVYRIRLPDRKIRWMEAFGQFSPHGAAKPSKLAGVCMDITERKEAESQRNLLVAELS
HRVKNTLAIVSSIARQSFSTNPDVHDAHRSFDARIRALAQTHTRLAEASWSGVSLETVLF
DELAPYHDDGKNNVMLSGPQTMLPPKYALTLGMAAHELATNAAKHGALSAKAGSVRIEWS
ADRESDRLKIRWSESGGPVVVAPKRNGFGRLLLERVLASDLGGEVQLEFAPQGLVCMIDV
PYPREPFP
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgcggagacgctgcccaaaatcgctttgggcgatcttagtatcttgcggtca
tcggattttcgtgcagcactcgatgcactggccgtggccgtctacacgacggatgcggac
ggcttcgtcacctattgcaacccagccgcagtcagtctcgcggggcgcgagccggaactc
ggccaagaccgctggtgcgttagctggaagcttcgccggcccgatggcacaccgctgccg
cacgacgaatgcccgatggcaatggcgctgaaagggcgacagcccatccggggagaggaa
ctggtggcggttcgccccgacgggtcgaccgcgttgctcctcccgcatccgacaccgatc
ttcgacgagtctggtgaacttaccggcgcggtcaatctcctcgtcgacatcaccgaccac
aagagcgcagaaaaggactcccgctatctggccgcaattgtcgaatcctcggacgacgcc
atcgtcgccaaggatttgaacggcatcattacgagttggaacaagggtgccgaacggctg
ttcggatatacggccgacgaagtcgtgggcaagtcgatcaccattctcatgccgccgggt
tatgagaacgaggagcccaacatcctcaggcgcatccgctgcggcgagcgcatcgatcac
taccagacgacgcgccgccgcaaagacggcagtctcgtcgatatttcgctgacagtctcg
ccggtccgagacgctctggggcggattgtcggcgcgtccaagatcgcccgcgatatcacc
gaacaacggcaagccagcgagacgctggcggcgcgtttgcgcgaacaggcggcgctctac
cgcctcaccgagaggctgcaccgggcccaggacatctcagaggtctacgaggcggcgctg
gatgccattcagggcgcgctctgctgccaccgggcctccattctgcttttcgaaagctcc
gcaaagatgcacttcgtcgcctggcgcggtctttcggctgagtatcggaacgccgttgac
gggcactctccctggacgtgcgaggagcgggacccggagcccatcttcctccaagacgtt
gcacaagctgaggccctgaccgcccttaggccgaccatcgaggcggaaggtatcgcagca
ctcggcttcatcccactcgtcgcagaaggcaggctcatcggcaagttcatgacctattat
gatctgccgcatgctttcaccgacaacgagatcgacctggcattgacgatcgcccggcag
ctcggcttcagcattcaacgtatgcgagccgacgaggcgcgttgtcttgcggagcagcag
ttgcggcgcaacgaggcaaacgaacgggcacgcgccgccgaattgatggcaatcatggag
gccgtgccggcctccatctggatctcacggacgcccgattgccgtgtcatcagcggcaac
cgagccgcctatgagctccttcggcagcgacccgacacgaacctgtcgctgtcggccgcg
cccggcgagcgccccgacagcttccgtgtcttctccatgggaaagatgctatcgcccgac
gagctcccggtgcagcgtgcggcgcgcggcgaggtcgtgccgaacttcgaggaagaagtc
cgcttcgaagacgggacgtcgcgtcacctgttcgggaatgcgacgccgctgcgggacgcc
gccggcgacgtgatcggcgcggtggcggcatcggtggacattaccgagcgcaagcaggcc
gaagaagcgctgcaggagagcgaacgccggctgcaaatcgccctcggcgccggccggatg
ggggcttgggaatggaacattggcaccggcaaggtcgtatggtcgccgggcctcgaggcg
cttcatcatctcgaaccgggaactttcggtggtacgcttgacgatttcaaacgggacata
catcccgatgacctttgcctcgtcgaactggagatcgccagggcgatggagtcccgccag
gattatcatgtcgtctaccggatcaggctccctgacagaaagatccgctggatggaggcg
ttcgggcagttttcgcctcacggtgccgcgaagccaagcaagctggccggcgtctgcatg
gatatcaccgagcgcaaggaagccgagtcgcagcgcaacctcctggtcgccgagctcagc
catcgcgtcaagaacacacttgcaatcgtaagctcgatcgcgcgccagtccttctccacc
aatccggatgtgcatgacgcgcatcggtcgttcgatgcccgcatcagggccctggcgcaa
acgcatacgcgtctcgccgaagcaagctggtcaggcgtctcgttggaaaccgtgcttttc
gacgagttggctccctatcatgatgacggcaagaacaacgtgatgctctcgggcccgcaa
acgatgctgccgccgaaatacgccctgaccctcggcatggcggcccacgaactagccacc
aacgccgcgaagcatggtgcgctttccgcgaaggctggcagcgtccgcatagaatggtcg
gcggaccgggaatccgatcggctcaaaatccgctggagcgaatcgggcggcccggtcgtc
gtcgccccgaaacgcaacggttttggccgcctgctgctggaacgcgtgctggcctccgac
cttggcggcgaagtccaactcgaattcgcgccgcaaggcctggtctgcatgatcgatgtc
ccctaccctcgcgaacccttcccatga
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