Sinorhizobium fredii USDA 257: USDA257_c30450
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Entry
USDA257_c30450 CDS
T02188
Name
(GenBank) putative DNA-directed DNA polymerase protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
USDA257_c30450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfd03400
]
USDA257_c30450
Enzymes [BR:
sfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
USDA257_c30450
DNA repair and recombination proteins [BR:
sfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
USDA257_c30450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFL51615
UniProt:
I3X6V9
LinkDB
All DBs
Position
complement(3195958..3196599)
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AA seq
213 aa
AA seq
DB search
MPTEPVKMGPALSGEYAEAPSIAALRKQAEGCERCDLYKNATQLVFGEGPSKARVVLVGE
QPGDREDLAGRPFVGPAGRILDECLHEAGIDRTSCYLTNAVKHFKFEQRGKRRLHSRPNA
GEIQRCSWWLGAELEKLHPEVVVALGATALSSLLGRRAGVMKNRGDLIATPAGYPVLVTI
HPSYLLRIQSREDAAAERDRFVKDLAKIAAHVD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgaacctgtcaaaatgggtccggccctctccggcgagtacgccgaggccccc
tccattgcagcgctgcgcaaacaggccgagggctgcgagcgctgcgacctctacaagaat
gcgacgcagctggtgtttggcgaaggacccagcaaggcccgcgtcgtccttgtcggcgaa
cagcccggcgatcgtgaggatctggcgggccgaccgtttgtcgggccggccggacgcatt
ctggacgagtgcctgcatgaggcgggtattgatcgaacaagctgctatctcaccaatgcg
gtcaagcatttcaagttcgagcaacgaggcaagcgccgactgcattcacgaccgaatgca
ggagagatccagcgctgctcctggtggctcggcgcggagcttgagaagcttcaccccgag
gtcgtcgtcgcgcttggcgctacggcgctttcatcgctcttgggacgccgcgccggcgtg
atgaagaaccgcggcgacctgatcgccacgcccgccggctacccggttcttgtcacgatc
catccgtcctatctgctgaggatccagagccgagaggacgcggcggccgaacgcgaccgc
ttcgtcaaggacctcgccaagatcgcggcccatgtcgactaa
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