Sinorhizobium fredii USDA 257: USDA257_c42500
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Entry
USDA257_c42500 CDS
T02188
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfd03021
]
USDA257_c42500
Transcription machinery [BR:
sfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
USDA257_c42500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_16
HTH_29
HTH_1
HTH_38
HTH_20
DUF134
Motif
Other DBs
NCBI-ProteinID:
AFL52789
UniProt:
I3XA83
LinkDB
All DBs
Position
complement(4435755..4436285)
Genome browser
AA seq
176 aa
AA seq
DB search
MDAELVDRAVKGDREAFGRLIERHYDFVHAVAWRWSGSETDAEDIAQDVCIRLGAAIRGF
RGTSRFRTWLYTLALNAARDHRRRQARNERKLEAYASDPALKAGSGSDDEDRREALWAAV
RALPEKQCDAVLLVYAEGLSHAAAADVLGCSEATISWHVHEARKRLRTLLGKEAVQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
ttggacgcggaactcgttgacagggcggtgaagggggatcgcgaggccttcggccgattg
atcgagcgtcactatgatttcgtccatgcggtcgcctggcgctggtcgggcagcgagacc
gacgcggaggatatcgcccaggacgtctgcattcggctaggcgcagcgatccgcggtttc
cgcggcaccagtcggttccgaacctggctctatacgttggcgctgaatgcggcgcgcgat
caccggcgccggcaggcgcgcaacgaacgaaaactcgaggcctatgcgtccgatcccgca
ttgaaagctggttcaggaagcgatgacgaggaccggcgggaggcgctctgggcggcggtg
cgggcactgccggaaaagcaatgcgatgccgtgttgctcgtttatgccgagggcctgagc
catgcggcagccgccgacgtgctcggctgctcggaagcgaccatctcctggcacgtccac
gaggcgcgcaagcgcctgcggacgctgctcggcaaggaggcagtgcaatga
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integrated database retrieval system
