Sinorhizobium fredii USDA 257: USDA257_c53760
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Entry
USDA257_c53760 CDS
T02188
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c53760 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c53760 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c53760 (lysS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
USDA257_c53760 (lysS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
USDA257_c53760 (lysS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
USDA257_c53760 (lysS)
Prokaryotic type
Other AARSs
USDA257_c53760 (lysS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AFL53899
UniProt:
I3XDE3
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All DBs
Position
5584485..5585981
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AA seq
498 aa
AA seq
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MNEKTVTAGLSSDATEVRAQKLDLLREQIGEVYPAHFHRTLTNAELAEKYAGLEPDTESG
DTVTVAGRVFSSRNSGMFMDIHDASGKIQIFSHKDTAPEEARVLLPMIDLGDIIGVTGEV
RRTKRGELTVNAKEITMLCKSLLPMPEKYHGLADIETRYRKRYLDIMVNEDSKLRFQQRS
RIVSSLRRVLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRVL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDMMGLVERMFETLALAVHG
KTEFEFGDKQLSFKGPFPRVSMPAAVKDAIGVDFLAINTDEEAREAARNAGLEVEKDATW
GEVLAFIFEEKVEATLIQPAHVIHFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFS
ELNDPVEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTN
SPSIRDIILFPARRHKGD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaagacagtaaccgccggcctttcctccgacgcaaccgaagtgcgcgcccag
aagcttgacctgctgcgcgagcagatcggcgaagtctacccggcgcatttccaccgcacg
ctgaccaatgcggaactcgccgaaaaatatgccgggctggagcccgatacggagagcggc
gacacggtgacggtcgcaggccgggttttctcctcgcgcaattccggcatgttcatggat
atccatgacgcctccggcaagatccagatcttttcgcacaaggacacggctccggaagag
gcgcgtgtgcttctgccgatgatcgaccttggcgacatcatcggcgtcaccggcgaggtg
cgccgtacgaagcgtggcgagctgacggtgaatgccaaggaaatcaccatgctctgcaag
tcgctcctgccgatgccggagaagtatcacgggcttgccgacatcgagacgcgctaccgc
aagcgctatctcgacatcatggtcaacgaggactcaaagctccgcttccagcagcgcagc
cgcatcgtttcgagtctgcgccgcgtcctcgaggacgagggcttcatggaagtcgaaacg
ccgatgctacagccgatctatggcggcgcgacggccgagccgttcaagacgcatcacaac
acgctgaagctcgacatgtatctgcgcattgcgcccgagctttatctgaagcgcgtgctg
gtttccggcctcaccgataaggtcttcgagatcaaccgcaacttccgcaacgaaggcgtc
tccacccggcacaatccggaattcacgatgatggagtgctactgggcctatgcggactac
gaggacatgatgggcctcgtcgaacgcatgttcgagaccctggcgctggcggtccacggc
aagaccgagttcgaattcggcgacaagcagctctcctttaagggaccgttcccacgcgtg
tcgatgccggccgccgtcaaggatgcaatcggcgtcgacttcctcgcaatcaacaccgac
gaggaggcccgcgaggcggcaaggaacgctggcctcgaggtcgagaaggacgccacctgg
ggcgaggtcctcgctttcatcttcgaggagaaggtcgaagcgacgctgatccagccggcc
catgtcatccatttcccgaaggacatttcccccttcgccaaggaggtgccgggcgagccg
cggctcgtagagcgcttcgagacctattgcaacggctgggagatcggcaacgccttctcc
gagctcaacgacccggtcgagcagcgcgcccgcatggtcgagcagatggaacaggcccat
gcccgcggcgaaaaggaaaagaccctcgacgaggacttcctcgacgccatggaccagggc
atgccgccggccggcggcctcggcatcggcgtcgaccggctgatcatgctgctcaccaat
tcgccgtcgatccgcgacatcattctcttcccggcccgtcgtcacaagggcgactga
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