Sinorhizobium fredii USDA 257: USDA257_c57930
Help
Entry
USDA257_c57930 CDS
T02188
Symbol
pyc
Name
(GenBank) pyruvate carboxylase Pyc
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00020
Citrate cycle (TCA cycle)
sfd00620
Pyruvate metabolism
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
sfd01200
Carbon metabolism
sfd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
USDA257_c57930 (pyc)
00620 Pyruvate metabolism
USDA257_c57930 (pyc)
Enzymes [BR:
sfd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
USDA257_c57930 (pyc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Biotin_carb_N
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
ATPgrasp_Ter
ATP-grasp_5
G8
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AFL54304
UniProt:
I3XEJ8
LinkDB
All DBs
Position
complement(6012480..6015719)
Genome browser
AA seq
1079 aa
AA seq
DB search
MIRVAKLSGADAIHPGYGLLSESPEFAEACAENGITFIGPKPETMRQLGNKVAARNLAIS
IGVPVVPATEPLPDDPAEIKRLADEIGYPVMLKASWGGGGRGMRAIRDPKDLIREVTEAK
REAKAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSIQRRNQKVVERAPAP
YLNEAQRQELADYSLKIAQATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVT
GIDIVKAQIHILDGFAIGTPESGVPKQADIRLNGHALQCRITTEDPEQNFIPDYGRITAY
RGATGFGIRLDGGTAYSGAIITRYYDPLLEKVTAWAPTPDEAIRRMNRALREFRIRGVAT
NLTFLEAIIGHPRFHDNSYTTRFIDTTPELFQQVKRQDRATKLLTYLADVTVNGHPEAKG
RPKPNDDIAAPVVPFINGEVKPGTKQRLDELGPKKFAEWVKAQPEVLITDTTMRDGHQSL
LATRMRTYDIARIAGTYARALPNLFSLECWGGATFDVSMRFLTEDPWERLAMVREDAPNL
LLQMLLRGANGVGYKNYPDNVVKYFVAQAAKGGIDVFRVFDCLNWVENMRVAMDAVAQEN
KICEAAICYTGDILNSARPKYDLKYYTALAAELEKAGAHIIAVKDMAGLLKPAAARVLFK
ALKESTDLPIHFHTHDTSGIAAATVLAAVESGVDIVDAAMDALSGNTSQPCLGSIVEALA
GTERDPGLNPEWIRRISFYWEAVRHQYAAFESDLKGPASEVYLHEMPGGQFTNLKEQARS
LGLETRWHEVAQAYADANRMFGDIVKVTPSSKVVGDMALMMVSQDLTVADVENPAKDVSF
PDSVVSMLKGDLGQPPGGWPEGLQKKALKGEEPYTAVPGSLLPPADLDAERKSIEEKLGR
ELDDFEFASYLMYPKVFTDYAIACETYGPVSVLPTPAYFYGMAPGEELFADIEKGKTLVI
LNQAQGEIDEKGMVKMFFELNGQPRSIKVPDRNRGASAAIRRKAEAGNAAQLGAPMPGVI
STVAVHPGQPVKAGDVLLSIEAMKMETALHAERDGTIAEVLVRAGDQIDAKDLLIVFGA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcgtcgccaagctgtcgggcgcagacgccatccatccgggctacggactgctg
tcggaaagtccggaattcgccgaggcctgcgccgagaacggcatcaccttcatcggcccg
aagccggaaacgatgcgccagctcggcaacaaggtggcggcccgcaacctggcgatctcg
atcggcgtgccggtcgtgccggcgaccgagccgctgccggacgacccggccgagatcaag
cggctcgccgacgagatcggctatccggtgatgttgaaggcctcctggggcggcggcggc
cgcggcatgcgggcgatccgcgacccgaaggacctgatccgcgaggtgaccgaggcgaag
cgcgaggcgaaggccgccttcggcaaggacgaggtctatctcgaaaagctcgtcgagcgg
gctcgccatgtcgaaagccagattctcggcgacacgcacggcaatgtcgtgcatctgttc
gagcgcgactgctcgatccagcggcgcaaccagaaggtcgtcgagcgcgcgccggcgccc
tatctcaacgaggcgcagcggcaggagcttgccgactattcgctgaagatcgctcaggcg
accaactatatcggcgccggcaccgtcgagtatctgatggatgccgacaccggcaagttc
tacttcatcgaagtgaacccgcgcatccaggtcgagcacacggtgaccgaggtggtcacc
ggcatcgatatcgtcaaggcgcagatccacatcctcgacggctttgccatcggcacgccg
gagtcgggcgtgccgaagcaggcggacatccgcctcaacggccacgccctgcagtgccgc
atcaccaccgaggacccggagcagaacttcattccggactatggccgcatcaccgcctat
cgcggcgccaccggcttcggcataaggctcgacggcggtaccgcctattccggcgcgatc
atcacccgctattacgatccgctgctcgagaaggtcaccgcctgggcgccgacgccggac
gaggcgatccgccgcatgaaccgggcgctacgcgaattccgcatccgcggcgtcgcgacc
aacctcaccttcctcgaggcgatcatcggccacccgaggttccacgacaacagctacacg
acccgcttcatcgacacgacgccggaactgtttcaacaggtgaagcgccaggaccgcgcc
accaagctgttgacctatctcgccgacgtcaccgtcaacggccatccggaggcgaagggc
cggccgaagcccaacgacgacatcgccgctccagtcgtgccgttcatcaatggtgaggtg
aagccgggcaccaagcaacggctcgatgagcttggtccgaagaagttcgccgaatgggtg
aaggcgcagcctgaggtgctgatcaccgacacgacgatgcgcgacggccaccagtcgctg
cttgccacccgcatgcgcacctatgacatcgcacggatcgccggcacctatgcccgggcc
ttgccgaacctgttctcgctcgaatgctggggcggcgccaccttcgacgtgtcgatgcgc
ttcctgaccgaggatccgtgggagcggctggcgatggtgcgcgaggacgcgccgaacctg
cttctgcagatgctgctgcgcggcgccaacggcgtcggctacaagaactatccggacaat
gtcgtcaaatacttcgtcgcccaagcggccaagggcggcatcgacgtgttccgcgtcttc
gactgcctgaactgggtcgaaaacatgcgcgttgcgatggatgctgtggcgcaagaaaac
aagatctgcgaggcggcgatctgctataccggcgacatcctgaattccgcccggccgaaa
tacgacctgaaatactacacggcgctggccgctgaactggaaaaggccggcgcccatatc
atcgccgtcaaggacatggccggattattgaagccggccgccgcacgggtgctgttcaag
gcgctgaaggaatcgaccgacctgccgatccatttccacacccacgacacctcgggcatc
gccgcggcgaccgtgctggcggcggtcgagtccggcgtcgacatcgtcgatgcggcgatg
gatgcgctgtccggcaacacttcgcagccctgcctcggctcgatcgtcgaggcgctggcc
ggcaccgagcgcgaccccggcctgaatccggaatggatccgccgcatctccttctactgg
gaggcagtgcgccatcaatacgcggccttcgagagcgacctcaagggaccggcctcggaa
gtctacctgcacgagatgccgggcggccagttcaccaacttgaaggagcaggcccgctcg
ctcggccttgagacacgctggcacgaggtggcgcaggcctatgccgacgccaaccggatg
ttcggcgatatcgtcaaggtgacgccgtcctccaaggtggtcggcgacatggcgctgatg
atggtctcgcaggacctgacggtcgccgatgtcgagaacccggccaaggacgtctccttc
ccggactcggtcgtatcgatgctgaagggcgatctcggtcagccgccgggcggctggccg
gaagggctgcagaagaaagcgctgaagggcgaagagccctatacggccgtgccgggttcg
ctgctgccgccggccgatctcgacgcggagcgtaagagcatcgaggagaaactcggccgt
gagctcgatgatttcgagttcgcttcctatctgatgtatccgaaggtcttcaccgactat
gcgatcgcttgcgagacctatggtccggtcagcgtgctgccgacgccggcctatttctac
ggcatggcgccgggggaggaactgttcgccgatatcgagaagggcaagacgctggtgatc
ctcaaccaggcgcagggcgagatcgacgagaagggcatggtcaagatgttcttcgaattg
aacggccagccgcggtcgatcaaggtgccggaccgcaaccgcggcgcttccgccgccatt
cgccgcaaggccgaggccggcaacgccgcccagctcggcgcgccgatgccgggcgtcatc
tcgacggttgccgtccatcccggccagccggtcaaggccggcgacgtgctgctctccatc
gaggcgatgaagatggagacggcgctgcacgccgagagggacggcacgatcgccgaggtg
ctggtcagggccggcgaccagatcgacgccaaggatctgctgatcgtgtttggtgcttga
DBGET
integrated database retrieval system