Sinorhizobium fredii USDA 257: USDA257_c61350
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Entry
USDA257_c61350 CDS
T02188
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c61350 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c61350 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c61350 (pheT)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
USDA257_c61350 (pheT)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
USDA257_c61350 (pheT)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
USDA257_c61350 (pheT)
Prokaryotic type
USDA257_c61350 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AFL54633
UniProt:
I3XFH7
LinkDB
All DBs
Position
6392259..6394685
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AA seq
808 aa
AA seq
DB search
MKFPLSWLKDHLETDASLEEICARLTMIGLEVEGVDDKAAFKPFVIAKVISAEQHPNADK
LRVLMVDTGNGSPVQVVCGAPNARKGLVGAFAAPGTYVPGIDVTLSVGNIRGVESRGMMC
SEKELEISDNHTGIIDLPEDAPVGTSYAAYAGLDDPMIEINLTPNRPDCTSVHGIARDLA
ASGLGTLKTRPAPSFPVEGETPVKVRLELGEDKHLCPGFALRLVRGVKNGPSPVWMRRRL
TAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVNGNLTVRRAKEGEKVLALDAREYTLS
PANVVITDEDGIESIGGIMGGEHSGCDEATTDVLIESALWDPMNIAKSGRTLGIITDARY
RFERGVDPEYMVPGLERATELVLELCGGTAAKLDVVGYEGHTPKVVDFPVSEVKRLTGLE
VSTEESVSILEELGFGVEGSGERFRVTVPSWRPDVDGKADLVEEVMRIHGVDNIVAAALP
SHNAVNGKILTTLQIRTRQARRGLASRGMLEAVTWSFISEEQAKLFGGGQPGLKLANPIA
ADMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYEGDTPEAQRRVAGGVRRGTASL
NGAGRLWSNAVKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPDWYHPGRSGTIK
LGPKIVLGAFGEFHPKTLDALDVSGPIAGFEIYVDAMPEPKKKTTRTKPALELSPFQAVK
RDFAFVVDKEVEAAAVVRAASGADRKLVTGVNVFDVFEGASLGEGKKSIAIEVTIQPVER
TLTDEDFEALTSRIVAIVAKSTGGVLRA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcccgctctcctggctgaaggaccatctggaaaccgacgcctcgctcgaggaa
atctgcgcgcgcctgacgatgatcgggctcgaggtcgagggtgtcgacgacaaggccgcc
ttcaagcccttcgtcatcgccaaggtcatttccgccgagcagcacccgaacgccgacaag
ctgagggtgctgatggtcgataccggcaacggctcaccggtgcaggtcgtctgcggtgcg
ccaaacgcgcgcaagggcctcgtcggcgcctttgccgcgccgggcacctacgtgccgggc
atcgacgtgacgctgtcggtcggcaacatccgcggcgtcgaaagccgcggcatgatgtgc
tcggaaaaggaattggagatatccgataaccacaccggcatcatcgacctgcccgaggat
gcgccggtcggcaccagctacgccgcctatgcgggcctcgacgatccgatgatcgagatc
aacctgacgccgaaccggccggattgcaccagcgttcacggcattgcccgcgacctcgcc
gcctccggcctcggcacgctgaagacaaggccggcgccctccttcccggtcgaaggcgaa
acgccggtcaaggtgcggctggagctcggtgaggacaagcatctctgccccggctttgcg
ctgcgtcttgtgcgcggcgtcaagaatggcccgagcccggtctggatgcgccggcggctg
acggcgatcgggcttcggccgatcaacgcattggtcgacatcaccaactacctgaccttc
gaccagggccggccgctgcacgtcttcgacgcggccaaggtcaacggcaacctgacggtt
cgccgggcaaaggaaggcgagaaggtgttggcgctcgatgcccgcgaatacacgctgtcg
cccgccaatgtggtgatcaccgacgaggacggcatcgaatcgatcggcggcatcatgggc
ggcgagcattccggctgcgacgaggcgaccaccgacgtgctgatcgagtcggcgctttgg
gacccgatgaacatcgccaagtccggccgcaccctcggcatcatcaccgatgcgcgctat
cgcttcgagcgcggtgtcgatccggaatatatggtgccgggcctcgaacgggcgaccgaa
ctggtgctggagctctgcggtggtaccgccgcgaagctggacgtcgtcggctatgagggc
catacgcccaaagtcgtcgacttcccggtctccgaggtcaagcggctgaccggtctcgag
gtctccaccgaggagagcgtttcgattctcgaggagctcggcttcggcgtcgagggctcc
ggcgagcgcttccgcgtcaccgtgccctcctggcgaccggatgtcgacggcaaggcggac
ctggtcgaggaagtcatgcgcatccatggcgtcgacaacatcgtcgcggccgccctgccg
agccacaacgccgtcaacggcaagatcctcacgaccttgcagatccgcacccgccaggcg
agacgcgggctcgccagccgcggcatgctagaagcggtcacctggtcgttcatctcggag
gagcaggcgaagctcttcggtggtggtcagccggggctgaagctcgccaatccgattgct
gccgacatgtccgacatgcggccgtcgctgctgccggggcttttgaccgccgcgcagcgc
aatgccgacaagggctatggtgacgtggcgatcttcgaggtctccggcacctatgagggc
gacacgcccgaggcgcagcgccgcgtcgccggcggcgtccgccgcggcaccgcctccctc
aacggcgccggccggctctggtcgaacgcggtgaagggcggaggcaagccggtcgacgtc
ttcgacgcgaaggccgatgcgatcgcggtgctcgaagcctgcggcgtgccgatggccaat
gtccagttcgaggccggcggcccggactggtaccatcccggccgctccggcacgatcaag
ctcggcccgaagatcgtgctcggcgccttcggcgagttccacccgaagacgctcgacgct
ctcgatgtctccggcccgatcgccggtttcgagatctatgtcgatgcgatgccggagcca
aagaagaagacgacgcgcactaagccggcgcttgagctctcgccattccaggcggtgaag
cgcgacttcgccttcgtggtcgacaaggaggtcgaggcggccgctgtcgtccgggccgct
tccggcgccgaccgcaagctggtaaccggcgtcaatgtcttcgacgtcttcgaaggcgcc
tcgctcggcgaaggcaagaagtcgatcgccatcgaggtgacgatccagccggtcgagcgc
acgctgaccgacgaggatttcgaggcgctgacctcgcgcatcgtcgccattgtggcgaaa
agcaccggcggcgtgcttcgcgcctga
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