Shigella flexneri 2002017 (serotype Fxv): SFxv_1375
Help
Entry
SFxv_1375 CDS
T01883
Symbol
dhaR
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K05880
transcriptional activator for dhaKLM operon
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfe03000
]
SFxv_1375 (dhaR)
Transcription factors [BR:
sfe03000
]
Prokaryotic type
Other transcription factors
Others
SFxv_1375 (dhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_4
GAF
PAS_8
AAA_2
Xre-like-HTH
AAA
HTH_17
AAA_5
PAS_7
AAA_7
AAA_16
HTH_50
ELMO_ARM
Motif
Other DBs
NCBI-ProteinID:
ADA73608
UniProt:
D2ADI9
LinkDB
All DBs
Position
1301680..1303608
Genome browser
AA seq
642 aa
AA seq
DB search
MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLG
QAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCA
LSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPL
TLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLR
LDATASQGRAITELLTLPAVLQQAIKLAHPLKHVEATFESQHQFIDAVITLKPIIETQGT
SFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEE
GVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHG
GTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRF
SRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWP
GNDFELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAII
NAAQVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatatgagtggcgcttttaacaacgatggtcggggcatatctcccttaattgca
acctcctgggagcgatgcaataagctgatgaaacgggagacatggaacgtaccacatcag
gcccagggcgtgacatttgcttctatttatcggcgtaagaaagcgatgctgacgctcggg
caggctgcgctggaagatgcctgggaatatatggcaccgcgagagtgtgcgctgtttatc
ctcgatgaaaccgcctgcattctcagccgtaatggcgatccgcaaaccttgcagcagcta
agtgcactgggattcaatgacggcacgtattgcgccgagggaattattggtacttgtgcg
ctatcgttagcggctatctctggtcaggccgtgaaaacgatggccgatcaacatttcaaa
caggcactctggaactgggccttttgtgcaacgccgttgtttgacagcaagggccgattg
acgggaacaatagcgctggcgtgtccggttgagcaaactaccgcagctgatttgccgttg
acgttggcaatcgcccgcgaggtcggtaatttactgctgacggacagtttgctcgctgaa
actaaccgtcatttaaatcaacttaatgccctgttagaaagtatggatgatggcgtgatt
agctgggacgagcagggtaatttgcaatttattaatgcccaggcggcgcgggtcttgcgc
cttgacgcgacggcaagtcagggacgggcaatcactgaactcttaacgttacccgccgta
ttgcaacaagcaataaaactggcacatccgctcaaacacgtagaagcaacctttgaaagc
cagcaccagtttattgatgcggtgataacccttaaaccgataatagaaacgcagggaacc
agctttattttgttgctccatcctgtggaacagatgcggcagttaatgaccagtcaatta
ggaaaagtcagccataccttcgctcatatgccacaggacgatccgcaaacccgccgcttg
attcattttggtcgccaggcggcgcgcagtagctttcctgtcctgctttgtggagaagag
ggcgtgggcaaggcactgctaagtcaggcaattcataatgaaagcgagcgtgctgcaggt
ccttatatcgccgtcaattgtgagttatatggtgatgctgcgctggcggaagaatttatt
ggtggcgatcgcacggacaatgaaaatggccgtctgagtcggctggaactggcacacggc
ggcacgctgtttcttgaaaagattgaatatctggcggtggagttacagtctgctttgctg
caggttatcaagcagggggttatcacgcgactggatgcgcggcgtttaataccaattgat
gtcaaagtgattgcaacaacgaccgcggacctcgcaatgctggtggaacaaaatcgtttt
agtcgccagctgtattacgcgctgcatgcatttgaaattaccatcccgcctctgcgtatg
cggcgtggcagcattccggcgctggtgaataacaaattacgcagtcttgaaaaacgcttc
tctacgcggctgaaaattgatgacgatgccctcgctcgcctagtttcttgtgcatggcca
ggcaacgattttgaactttacagcgtcatcgagaatcttgctctgagtagtgataacggg
cgcattcgcgtcagtgatttacctgaacatctgtttaccgagcaggcgacagatgatgtc
agcgccacccgcctttccaccagtctgtcatttgcggaagttgaaaaagaggcaattatt
aacgcagcccaggtcacaggcggtcgcattcaggaaatgtcggctttacttgggatcggc
cgcactacgctgtggcggaaaatgaagcaacatggcattgatgcagggcagtttaagcgc
cgggtatga
DBGET
integrated database retrieval system
