Serratia fonticola GS2: AV650_04900
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Entry
AV650_04900 CDS
T04716
Name
(GenBank) transcriptional regulator
KO
K07592
LysR family transcriptional regulator, tdc operon transcriptional activator
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfg03000
]
AV650_04900
Transcription factors [BR:
sfg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AV650_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
CggR_N
Motif
Other DBs
NCBI-ProteinID:
ALX92935
LinkDB
All DBs
Position
complement(1084840..1085748)
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AA seq
302 aa
AA seq
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MRYLPKLQQLKVFQQVIRSGSIRGAARALEQSQPAVSRTIRELEQILETQLINRSSQGMT
LTETGRAFALRMQLILEELQRAADEIQQLNQHSQGNVAIGCSSLLALTVLPELVEAFKQP
FPQANLLIREAQLSTLLPALREGRLDFAVGTVSPELPLEDLVREPLFNASFCIIARQGHP
LAQATSLDELREAKWLLPETDMGYYQQLRAVLGTFYQQLSRSPIRSDSVTCGLNMVLEAD
YLTIVARAMSAPFYLQRRLVALPIDTLPQAQYCVLYSQKSPLTVTARRFLDLLRAHCLRY
PW
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatttaccgaagttacaacagttgaaagtcttccagcaggtgatccgcagcggc
agtattcgcggggcggcacgcgcgcttgagcaatctcaaccggcggtgagccgcaccatc
cgtgaactggaacagatcctggaaactcagttgatcaatcgcagcagtcagggaatgacg
ctgaccgaaaccggccgcgccttcgccctgcgaatgcagttgatcctggaggaattgcag
cgcgccgccgacgagatccagcagttgaatcagcattcgcaaggtaacgtcgccattggc
tgctcttcgctactcgccctgacggtattaccggaactggtcgaagccttcaaacagccg
tttccacaggccaatctgctgatccgcgaagcgcagctttctacgctactgccagcattg
cgcgaaggccgcctggattttgccgtgggtaccgtcagcccggaacttccgctggaggat
ctggtgcgtgaaccgctgttcaacgcctctttttgcattatcgcacgccaggggcaccca
ctggcgcaggccacctcgttggacgaattgcgtgaggccaagtggttattaccggaaacc
gatatgggttactaccagcagttgcgtgcggtgttaggcaccttctatcagcaattgagt
cgttcgcccattcgctcggactctgtgacctgtggcttgaatatggtgctggaggcggat
tatttgactatcgtggcgcgggcgatgagtgcaccgttctatttgcagcgtcggctggtg
gcattgcctatcgacacgttgccacaagcgcaatattgcgtgctgtattcacagaaatcg
ccgctaaccgtgacggcacggcgatttcttgatttattgcgtgcccactgcctgcgctac
ccttggtag
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