Sinorhizobium fredii HH103: SFHH103_02702
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Entry
SFHH103_02702 CDS
T01731
Name
(GenBank) putative ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfh03016
]
SFHH103_02702
Enzymes [BR:
sfh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SFHH103_02702
Transfer RNA biogenesis [BR:
sfh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SFHH103_02702
Prokaryotic type
SFHH103_02702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B
Lactamase_B_2
TAT_signal
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
CCE97197
UniProt:
G9ABA6
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All DBs
Position
2906494..2908011
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AA seq
505 aa
AA seq
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MNPESTGKKITSGEAGAGHGNMSRRDAIKTAGLAGVAALTTSAVSTAQTAEDTPAAAQAK
NPYGGVPSGGITLPPYYRPTPSLVSNNVYYPGQEQLGPDEMRISFIGSTPIPVTRAQAGT
CIMVELGNGKRFFFDFGSGCVRNIIAMAVPLSVVNDIFLTHLHVDHYADLPYLFAFAPWM
GRWKPLRVHGPSGRTPEDGIRTMIDGMKMMTRWHTDSFNACPIGDGYEVEVNEFDFRDDN
GICYDKDGVTIRHWRRSHTKDGASAYRLDWNGLSFVWTGDGRPDERSLELAKGVDVFVTE
VQPDTANLQAMKMGMPSVIMSTTIDQAHSPHYAVGYMFNRIQPRLAMVTHTTYDEELIPE
ITAGIRVHYSGLFQFGAPDVVVVNVTKDAIWTRKAAIPDAGNMARPSPAEAVELFGLTPT
NLKVTFPNPRNPLADQLESEILNGDIDPKRYYPPDVYREPKKDYPRDYTIDVREIALVKA
KKAQAKLSEKAAQIQAVIDAIEGSK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggaatcaacaggaaaaaagatcacaagtggcgaagctggcgctggtcacgga
aatatgagccgccgcgatgcaatcaaaacagcgggtctggctggagtggcggcgctaaca
acgagcgccgtgtcaacggcgcagacggctgaggatacaccagccgcagcccaggcgaaa
aacccttacggcggggtgccgagcggcgggatcacgcttccaccctactaccggcccacg
ccgagcctggtgagcaacaacgtctactatccgggccaggaacagctcggacccgacgag
atgcggatttcgttcatcggcagcacgccgatcccggtcacccgtgcacaggccggcacc
tgcatcatggtggagctgggaaacggcaagcggttcttctttgattttggctccggctgc
gtgcgcaacatcatcgcgatggcggtgcctctgtcggtggtcaacgacatcttcctcact
caccttcacgtggatcactacgcggacctgccgtatctattcgccttcgccccgtggatg
gggcgctggaagccgctgcgcgtgcatgggccatctggccgcacgcccgaggacggcatc
aggacgatgatcgacggcatgaagatgatgacgcgttggcacaccgactccttcaacgct
tgcccgatcggcgacggctacgaggtcgaggtcaacgaattcgatttccgggacgacaac
ggcatctgctacgacaaggacggcgtgaccatccggcactggcggcgatcgcacaccaag
gatggtgcttcggcctaccggctcgactggaatgggctgtcgttcgtctggactggcgac
ggtcgacccgacgaacgctctctggaattggccaagggtgtggacgtctttgtgaccgag
gtgcagccggacacggcgaacctccaggcgatgaaaatgggcatgccgtccgtcataatg
agcacgacaatcgaccaggcccacagcccacattacgcggtaggctacatgttcaacagg
atccagccgcgcctcgcgatggtcacgcatacgacttacgacgaggagttgatcccggag
atcacagccgggattcgcgttcattacagcggactgttccagttcggcgcgccagatgtc
gtggtcgtcaatgttaccaaggatgcaatttggacgcgcaaggcagcgattcctgatgcc
ggcaacatggcacgtccgagccccgcagaggcggtcgaactgttcggcctgaccccgaca
aacctgaaggtcacatttccaaatccccgtaacccgctcgctgaccaattggagtcggaa
atcctcaatggggacatcgaccctaagagatattacccaccggacgtgtatcgcgaaccg
aagaaggattacccaagggactacaccatcgatgtccgcgaaatagctctcgtgaaggca
aagaaggcccaggccaagctctcggaaaaggctgcccagatccaggccgtcatcgatgct
attgaagggagcaagtag
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